Photobacterium profundum: PBPRA1017
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Entry
PBPRA1017 CDS
T00173
Name
(GenBank) Hypothetical DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03030
DNA replication
ppr03430
Mismatch repair
ppr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBPRA1017
03430 Mismatch repair
PBPRA1017
03440 Homologous recombination
PBPRA1017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppr03032
]
PBPRA1017
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA1017
Enzymes [BR:
ppr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBPRA1017
DNA replication proteins [BR:
ppr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBPRA1017
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBPRA1017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
ResIII
AAA_30
AAA_16
AAA_2
AAA_18
TsaE
AAA_7
AAA_assoc_2
RCF1-5-like_lid
PIF1
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
CAG19428
UniProt:
Q6LTE8
LinkDB
All DBs
Position
1:1126323..1128584
Genome browser
AA seq
753 aa
AA seq
DB search
MSYQVLARKWRPYQFSDVVGQSHVLTALSNALTHNRLHHAYLFSGTRGVGKTTIARIFAK
GLNCEQGITATPCGQCGTCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHLDN
DQIQSQLSNVLTQENVDFEPKALSLLSRAAEGSMRDALSLTDQAIALGNGQVHADSVSMM
LGTLNTDQALFLLEAVSGGQANTAMGGLEELASVGVEWDSLLRELAAQLHRVAMHQALPA
ALDMSAPDADRIITLSSVMTPQDVQLCYQIALQGRQDLAFAPDGRIGLEMVLLRMLAFRP
VSGSGITPQSINVPASEPAAPQQGMQRVQALKAQMGSQPQAATSQVTIPQVVAPHAVAPQ
HSDQQLAASPSSIQESAGTVPAEQQYQQHQQVPTSQEAFRQEPSRQEPTPPPAQYQQQAP
HSEQSAAPQNIPPAQPRSAASGLLAARNKLRSQSKRGNEEQPVKKGEPAPAKKVAMNVLD
RIANKHAGMRVPTTGNTATNSAMPASMIATQANGTQANVPEKKDEYQWKPMQPVAPEEDT
KLEVAPRKLKQALEHEKTPEMAKLLVNEAANQDSWSDLVTKLNVGRLVQQLALNSAFEQD
NNQVTLYLRQSQSHLDNPKAREQLAQAIGELQSVDIDLKIELSGKGQTPLEWREGLYQQK
LGQAKESLESDANVTFIRQRFAAVLDEDSIRPL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctggcacggaaatggcgaccgtatcaatttagtgatgtagtaggg
cagtcacatgtattaactgcattgtctaacgctctcacgcataaccgtcttcatcacgca
tatttattcagtggtacccgaggtgtgggtaaaaccactattgcacgaatttttgccaaa
gggcttaactgtgaacaagggattactgcaacaccttgtgggcaatgtggtacgtgtaaa
gaaattgatgagggacgttttgttgatctattagagatcgatgcggcatcaagaacgaaa
gtagaagatacgcgtgagttacttgataacgttcagtataagcctgcacgtggccgtttt
aaggtgtacttaattgatgaagtgcacatgttatctcgtcatagttttaacgccttatta
aagacgctagaagagccaccggaatacgttaaatttattctcgcaaccactgatcctcaa
aagttgccagtgacgattttatctcgttgtttgcagtttcatctaaagcatttagacaat
gatcagattcaaagccagttatcaaacgtattaacgcaagaaaatgttgattttgaaccg
aaagcattaagcctattatcacgtgctgccgaaggtagtatgcgtgatgcattaagtttg
actgaccaagcgatagcgctgggtaatggtcaagttcatgctgattcggtttcaatgatg
ttgggtacgttaaatacagatcaagcattgtttttgttagaggctgtttctggcggtcaa
gcgaatacagcgatgggtgggcttgaagaactcgcgagtgtgggtgtggaatgggatagt
ttactacgtgaattagccgcacaattacaccgtgttgccatgcatcaggcattaccggca
gcattagatatgagtgcccctgatgctgatcgtattattacgcttagttcagtaatgacc
ccacaagatgttcagctgtgttatcaaattgcgttgcaaggtcgtcaagatttagcgttc
gcacctgatggtcgtatagggcttgagatggtgttgctgcgcatgttggcgttcagacct
gtatcgggtagtgggattacacctcaatctattaatgtaccggcaagtgagcctgctgcg
cctcaacaaggtatgcagcgtgttcaagcattaaaagcacagatgggatcgcagccacaa
gccgctacttcacaagtcactattccacaagttgttgcaccacacgctgtagctccacaa
catagtgaccaacaattagcggctagtccaagttctattcaggaatcagcgggtacagta
ccggcagagcagcaatatcagcagcatcagcaagtgccgacgtcacaggaagcttttcga
caggagccttctcgacaagagccgacgccgccacctgcacagtaccaacagcaagctcct
cattcagagcagtctgcagcaccacagaatataccgccagcacaaccacgttcagcagct
tctggtttactggctgcgcgtaacaagttacgaagccagtcaaaacgtggtaatgaagag
caacctgtaaaaaagggtgaaccggcgccagctaaaaaagtcgcaatgaatgtgttagac
cgtattgccaacaagcatgcggggatgcgtgttcctaccacaggaaacactgcaactaac
agtgcgatgccggcgtcgatgatagcgactcaagcaaatggtactcaagcaaatgtgcct
gagaaaaaagatgagtatcagtggaaaccgatgcaaccggtagcacctgaagaagatacc
aagcttgaggttgctccgcgtaaattaaagcaagcgttagagcatgaaaaaacacctgaa
atggcgaaattacttgtcaatgaagcggcaaatcaggatagttggtccgatttagtgact
aagctaaatgtaggacggttagttcaacagctagcgttaaattcagcgtttgaacaagat
aacaatcaggttactttgtatttacgtcaatcgcagagtcacctagataacccgaaagca
cgagagcagctagcgcaagcaattggcgagctacagagtgtagacattgatttaaagatt
gagctgagcggtaaaggtcagacgccactagaatggcgagaagggctttatcagcagaag
ctgggtcaagcaaaagaaagtttagagagtgatgctaatgtcacttttatccgccagcgc
tttgccgcagtgttggatgaagacagtattaggccattgtaa
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