Photobacterium profundum: PBPRA1082
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Entry
PBPRA1082 CDS
T00173
Symbol
HNSA
Name
(GenBank) putative DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppr03036
]
PBPRA1082 (HNSA)
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA1082 (HNSA)
Chromosome and associated proteins [BR:
ppr03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
PBPRA1082 (HNSA)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PBPRA1082 (HNSA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF6952
DUF6604
DUF3037
Cytochrom_B562
Motif
Other DBs
NCBI-ProteinID:
CAG19493
UniProt:
Q6LT83
LinkDB
All DBs
Position
1:complement(1200362..1200757)
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AA seq
131 aa
AA seq
DB search
MSDVMKVLLNLRSLRALSREYTVEQLQEALEKLQTVVSERTEAEAEDLAKETERKEKLDH
YRELLMADGIDPEELLSSLAKAPKAKRAARPAKYKFIDENGEEKTWTGQGRTPSALKKAL
DDGKSLEDFEL
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgtaatgaaagtactattaaacctacgtagccttcgcgcactttctcgtgaa
tatacagtagaacaactacaagaagctcttgaaaagctacaaactgtcgtttcagaacgt
acagaagctgaagctgaagatttagcgaaagaaactgagcgtaaagaaaaactagatcat
taccgtgaattgctaatggctgatggtatcgaccctgaagaactattatctagcctagct
aaagcacctaaagcgaaacgtgctgctcgccctgctaaatataagttcatcgatgaaaac
ggtgaagagaaaacatggacaggtcagggccgtactccaagtgcacttaagaaagcacta
gatgacggtaaatctttagaagatttcgaattataa
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