Photobacterium profundum: PBPRA1119
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Entry
PBPRA1119 CDS
T00173
Symbol
EBIG631
Name
(GenBank) putative repressor protein luxO
KO
K10912
two-component system, repressor protein LuxO
Organism
ppr
Photobacterium profundum
Pathway
ppr02020
Two-component system
ppr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PBPRA1119 (EBIG631)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBPRA1119 (EBIG631)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppr02022
]
PBPRA1119 (EBIG631)
Two-component system [BR:
ppr02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
PBPRA1119 (EBIG631)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
Mg_chelatase
AAA_5
AAA
AAA_2
AAA_19
HTH_30
AAA_16
HTH_23
HTH_29
Parvo_NS1
AAA_22
TIP49
VpsR
HTH_7
AAA_7
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CAG19530
UniProt:
Q6LT46
LinkDB
All DBs
Position
1:1243539..1244996
Genome browser
AA seq
485 aa
AA seq
DB search
MAMESGIKQRQVLMVEDTASVAALYKSYLNPLGLNVTIVGTGRDALNFMKETVPELILLD
LRLPDMTGMEVLESVRLNHKNLPVVIMTAHGSIDVAVDAMRHGAQDFLIKPCEADRLRIT
VNNALKDNSKSQQSSKSKQGGAQYQGFIGNSIPMQAVYRVIESAASSKATVFVTGESGTG
KEVCAEAIHAASPRNDKPFVALNCAAIPKDLIESELFGHVKGAFTGASTERQGAVEMAHK
GTLFLDELCEMDLDLQSKLLRFIQTGTYQKVGSSKTSTVDVRFVCATNRNPWIEVQEGRF
REDLYYRLHVIPIALPPLRDRSDDMIEIAHALLALMSVEEGKNFSRFSSDVIDLFKLHTW
PGNVRELQNVIRNIVVLNSGEEVTLQMVPPPVSEISGAEIASSLRIASGVQKSTIVQKDI
LHTEPIERTAIEPLWIVEKRAIQAAIDACDGNVPRAAGLLEVSPSTIYRKLQAWQDAVGS
NREID
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtggcaatggaaagcggaataaaacaaagacaagtcctaatggtcgaagatacggcatcg
gtagcggcattgtataaatcttatctaaacccattaggattaaatgtcacgattgtcgga
acaggaagggatgcactgaacttcatgaaagagacagtgcctgaacttatcctactagat
cttcgtttacctgatatgacaggtatggaagtacttgaatctgtacgccttaaccataag
aatttacctgttgttattatgaccgctcacggctctattgatgttgcggtagatgcgatg
agacacggtgcccaagattttctgatcaaaccctgcgaagctgatcgtttacgcattacg
gtgaataatgcattaaaagataatagtaaaagtcagcaatcatctaaatctaaacaaggt
ggagcgcaatatcaggggttcatcggtaacagtatacctatgcaagccgtatatcgtgtt
attgaatctgcagcgtcgagtaaggcgacggtttttgttacgggtgaaagtggtacgggt
aaagaagtgtgtgctgaagcgattcatgctgctagtccgcgtaatgataaaccgtttgtc
gcattaaattgtgctgctattcctaaagatctcattgaaagtgagttatttggtcatgtt
aaaggtgcatttacaggtgcatcgacagaacggcaaggtgctgttgaaatggctcataaa
ggtacattgtttcttgatgaactttgtgaaatggatttggatttgcaaagcaagttgcta
cgttttattcaaacaggaacatatcaaaaagtaggctcttctaaaacgagtactgttgat
gtacgctttgtatgtgctacaaatcgtaatccgtggattgaagttcaagaagggcgcttc
cgagaagatctctattatcgcctacatgttattcctattgccttgcccccactgcgtgat
cgtagtgacgatatgattgaaatagcacatgctttattggcattaatgtctgtggaagaa
ggaaaaaactttagtcgtttttcttcagatgttattgatttgtttaagttacatacttgg
ccgggcaatgttcgtgaattacaaaacgttattcgtaatattgttgttttaaattctggc
gaagaagtgactcttcaaatggttccaccgccagttagtgagatatctggcgctgaaatt
gcatcctctctaagaattgcctctggagtacaaaaaagtacgattgtacagaaagacatc
ttacataccgaacccattgaacggactgcaattgagccgctttggattgttgaaaaacgc
gcaatacaagctgctattgatgcgtgtgatggtaatgttcctcgtgctgcaggtttgcta
gaagttagcccatcaacaatttatagaaaattacaagcttggcaagatgctgtaggtagt
aatagggagatcgattaa
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