Photobacterium profundum: PBPRA1223
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Entry
PBPRA1223 CDS
T00173
Symbol
SF4249
Name
(GenBank) putative trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppr03000
]
PBPRA1223 (SF4249)
Transcription factors [BR:
ppr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PBPRA1223 (SF4249)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_4
Peripla_BP_3
Peripla_BP_1
SpoIIID
HTH_3
HTH_IclR
AAA_18
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CAG19634
UniProt:
Q6LSU2
LinkDB
All DBs
Position
1:1377978..1378928
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AA seq
316 aa
AA seq
DB search
MTRKLTILDIAKLAGVGKSTVSRVLTNDPKVKIETRERVEQVIQESGFVPSKSAQAMRGG
SAKVVGVIISRLDSPSENKAVSGILDVIYTAGYDAVIMESQFSAEKTNEHLSVLQKRNVD
GVILFGFSGCDLSIVESLNHKAVVIAVDTGRISSVGYDNYGIIELAMANLQQQGKQHISF
IGVDPSDKTTGLMRLNAYIEYCESANIEPIYQTGQLSHESAYVLTDHVLKPETEAIVCAS
DTLAMGVAKRLQELDRSDVLVSGVGATDLLSFIFPNTFSIDPGYYAAGKASASLLIKQLA
GCHEVTHLTQKAMIAQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgactagaaaactcaccattttagatatcgcaaagttagcaggggttggcaaatccacc
gtttcgcgtgtgttaaccaatgatccaaaagtgaagattgaaacccgagaaagagttgaa
caagtcattcaagaatcaggttttgtgccatctaaatcagcccaagcgatgcgaggtggc
agtgcgaaagtggtgggagttattatctcgcggcttgattctccctcagagaacaaagcg
gtgagtggcattttggatgtgatttatacggcaggttatgatgccgtcattatggaaagc
caatttagtgctgaaaaaaccaatgagcatttgtctgtactgcaaaagcgcaatgtagat
ggggtgattttatttggctttagcggttgtgacttgtcgattgtggaaagtttgaatcac
aaagccgttgttattgcggtggacaccggacggatctcatctgtgggttacgataattat
ggcattattgagctggcaatggcgaatcttcaacagcagggtaagcagcacattagtttt
atcggtgttgatcctagcgataaaacgacaggtttaatgcgcctcaatgcgtatattgaa
tattgtgaatctgccaacattgaaccgatctatcagacgggtcaacttagccatgaaagt
gcttatgtactgacagatcatgtgcttaagcctgaaaccgaagcgattgtgtgtgcaagt
gatacgttagcgatgggagtggcgaagcgtttacaagaattagaccgcagtgatgtattg
gtttctggtgtgggcgcaacggatttattgtcttttatatttcccaataccttcagtatt
gatcctggttattatgcggcgggtaaagcgtctgcctccttacttatcaagcaactcgct
ggttgccacgaagttacacacctcacgcaaaaagccatgattgctcaatag
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