Photobacterium profundum: PBPRA1271
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Entry
PBPRA1271 CDS
T00173
Symbol
RSP1186
Name
(GenBank) Putative transcriptional regulator, rpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppr03000
]
PBPRA1271 (RSP1186)
Transcription factors [BR:
ppr03000
]
Prokaryotic type
Helix-turn-helix
Other families
PBPRA1271 (RSP1186)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
LacI
MarR
TetR_N
Xre-like-HTH
ABC_cobalt
Motif
Other DBs
NCBI-ProteinID:
CAG19682
UniProt:
Q6LSP4
LinkDB
All DBs
Position
1:1442138..1443085
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AA seq
315 aa
AA seq
DB search
MNCFLCCFSLFWQGDVNKICGVERKVITVTIEVDIVSRITERFSQLRDAEKKVAKLVIDD
LASAANASISQLADEAGVSEATITRFAKAVGCKNVRDLKMKLAQSIAIGQRFIHESPDQS
GIQGVYESIKNVININRKVVNEEDIATVVEMLQGARQVLSIGMGGGSTMLSQELQFRLFR
LGYAVTAYNDGLLARMVASTADSSDVMVVMSATGYTPEVVEPASIAKQYGLKVIAITAPN
SPLAEISDVVLPVVIQETDFIYKPSASRYAMMALIDVISTELALSHKRRSRDRLRRLKLA
LDSHRGGLDRQPLGD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgaattgttttttgtgctgtttctcactgttttggcaaggcgatgtgaataagatttgt
ggtgtcgagaggaaggtgataaccgtgactatcgaagtagatattgtttcaagaattaca
gaacgtttctcgcaattgcgagatgcagagaagaaagtggcgaagctagtaatagacgat
ttagcgtcagcagcgaatgccagtattagccaattggctgatgaagcaggcgtgagtgag
gcaactattacacggtttgctaaagcggtcggatgtaaaaatgtacgtgatttaaaaatg
aaattagcgcagtcgattgcaataggtcagcgctttattcatgaaagccctgaccaatca
ggcattcaaggggtttatgagtcgatcaaaaatgtgatcaacataaaccgtaaagtggtc
aacgaagaagatatagcaacggttgttgaaatgctgcaaggggcaaggcaagtgttatcg
attggcatgggtggaggctccaccatgttatcgcaagaactgcagtttcgtttattccgc
ttaggatacgcagtgacagcttataacgatggcttacttgctcgaatggttgcatcaacc
gcagacagcagcgatgtaatggtggtgatgtcggcaacaggttatacccctgaagtggtc
gagccagcttctattgcaaagcagtatggattgaaagtgatagccattacagcgccgaac
tcaccattggctgaaataagcgatgtagtactgcctgtcgttatccaagaaacagatttt
atctacaaaccatcggcttcacgttacgcaatgatggcgctgattgatgtgatatcaaca
gaactggcattaagtcataaacgtcgttctcgagaccgattacgtcgtttgaagttggca
cttgatagtcatcgcggtggtttggatagacagcctttaggcgattaa
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