Photobacterium profundum: PBPRA1381
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Entry
PBPRA1381 CDS
T00173
Symbol
VP2168
Name
(GenBank) hypothetical protein
KO
K03442
small conductance mechanosensitive channel
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRA1381 (VP2168)
Transporters [BR:
ppr02000
]
Other transporters
Pores ion channels [TC:
1
]
PBPRA1381 (VP2168)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
GNAT_acetyltran
DUF3382
Motif
Other DBs
NCBI-ProteinID:
CAG19792
UniProt:
Q6LSD4
LinkDB
All DBs
Position
1:complement(1553909..1555552)
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AA seq
547 aa
AA seq
DB search
MRVLAFLYVFISSFCFAQAETPQSQIEVVSPQIEKLNTLDNEISKLAKEASTMTGSARDV
VSLQLLNKNNDLRDVIESLISNRTEETQPLLLTHVHQQVTFISDASAFFLKKIEEGEITL
DKASSEEKLIAQKKLDEARRFSTRLLGEQWVNYQWLKLLGEESPEKVQALIDDIDHRLEF
MSASLTFDSQQEEVLAKQLKSASEGEKSSVQLLHLLAQRKVASDTDSLQFLVQLADKMKL
DTAKYKQQLFESTGNLTKDLLDAKVIMSIIATWTSGITLWIYQNAPQILFKLLIFVAIIF
VFRLLKKLTRKMVKRAVSSPNLKLSQLMQEFFISMSGKGVFFIGLLIALSQVGLNLAPIL
TGFGVAGVIIGFALQDTLSNFASGMMLLIYRPFDVGDFVEAGSVSGKVSHMSLVNTTIKT
FDNQIIIVPNSKIWGDIIKNVTHERVRRVDMVFGIGYSDDIVLAETVLNDIIDAHPMILR
QPEKTIKLHTLNTSSVDFIVRPWVKTEDYWDVYWDVTREVKMRFDREGLSIPFPQQDVHL
HMVDKKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtattggctttcttatacgtttttatatcatcgttctgtttcgcacaagccgaa
accccgcagtctcagatagaagtagtatcgcctcaaatagaaaaactcaatacattagat
aacgaaatctctaagctggctaaagaagcatcaaccatgacgggatcagccagagatgtc
gttagcttgcagcttttaaataaaaataacgatcttcgagatgttatagaaagcttaata
tcaaatagaacagaagaaactcaaccacttctactaacacatgttcatcagcaggttaca
ttcatttctgacgcgtcggctttctttttaaagaaaatcgaagaaggtgaaataacccta
gataaagccagtagtgaagaaaaactcattgcacaaaaaaaacttgatgaagctcgacga
ttttcaacccgcttattaggtgagcaatgggttaactatcaatggttaaaactactaggc
gaagaatcacctgaaaaagtacaagcattaatcgatgatatcgatcatcgcctagaattt
atgtctgcatctttaacgttcgatagccaacaagaagaagttttagccaagcagttaaaa
tcggcatctgaaggtgaaaaatcttcggtacaattattacatttactcgcacaacgaaaa
gtggctagtgatactgatagcttgcagtttttagttcagctcgcggataaaatgaagctt
gatactgcaaaatataagcaacaactatttgaatctacaggtaatctaaccaaagatttg
ttggatgcaaaagtcatcatgtcgattatagcgacatggactagcggcattacattatgg
atttatcaaaatgcaccacaaatattatttaagctccttatttttgtcgccattattttt
gtgttccgtttactaaaaaaactcacccgaaagatggttaaacgtgcagtatcgtctccc
aatttaaaattatcgcaactcatgcaagaattctttatctcgatgtctggtaaaggcgtg
ttcttcattggtttacttattgcgttatctcaagttggcttgaaccttgcccctattctg
actggtttcggtgttgcaggtgtgattattggttttgcattgcaagataccctatcaaat
ttcgcgtcaggcatgatgctacttatctatcgtccatttgatgtcggtgattttgtagaa
gctggtagtgtatcgggaaaggttagccatatgagcctggttaataccacaatcaaaacc
tttgataaccaaattattattgtacctaacagcaaaatctggggcgatattatcaagaac
gtcacccatgagcgtgttcgtcgggttgatatggttttcggtattggttatagcgacgat
attgtactggcagaaacagtgttaaatgacattattgatgctcatccaatgattctgcgc
caaccagaaaaaacaattaagttgcatacgttaaatacatcatcagttgattttattgtt
cgcccttgggtaaaaacagaagattattgggacgtgtattgggatgtaacccgcgaggtg
aagatgcgtttcgaccgcgaaggcttgtcgattccatttccacaacaagatgtacatttg
cacatggtcgacaaaaaaacgtaa
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