KEGG   Photobacterium profundum: PBPRA1598
Entry
PBPRA1598         CDS       T00173                                 
Name
(GenBank) hypothetical ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ppr  Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:ppr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppr03400]
    PBPRA1598
Enzymes [BR:ppr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PBPRA1598
    5.6.2.6  RNA 3'-5' helicase
     PBPRA1598
DNA repair and recombination proteins [BR:ppr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PBPRA1598
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: CAG20009
UniProt: Q6LRR7
LinkDB
Position
1:1829710..1831908
AA seq 732 aa
MMDEYQRLDTRIQKWVFKQGWSDLREIQKRAINPILSGDRDVLISASTAAGKTEAFFLPA
CSATADMEQGFGILYISPLKALINDQYRRLESLCEELDMPVTSWHGDSSQSKKKKAKKTP
SGILLITPESLESLLVRDAGWVQQAFGFLKYIVIDEFHVFIGSDRGLHLLSLLNRLEHLL
KRYSSPIPRVALSATLGELDQVPLSLRPNKSMPCEIITSSKSHTTLKVQVRGYIEPLDLQ
SDDLRDSAEDQICKELYRLCRGSSHLVFANSRKRTESIAAQLSDLCEANIVPNEFFPHHG
SLSKELREELEARLQKEMLPTTAVCTMTLELGIDIGKVNSVVQVTAPHSVSSLRQRMGRS
GRRNSPAILRMLISEDELTKSSSIIDKLRMELVQSLAMIRLLIASKWFEPADTSQMHFST
LLHQVLAVTAQWGGIRADQLYTLLCTNGPFQKTTIQHFKLLLSHMGFCELLTQLSSGELV
LGIQGERLVSQYTFYAVFKTPEEFRVVVGNKTLGTLPIDSVVIQGQHIIFGGCRWKVLDV
DSDKKVIHVEATKGGKPPSFGGEGMSIHDVVRQEMFQIYCEGDYLIQVGHGKVDYIDTVA
KGLFKEGACYFKDSKLESKSIIQQGQYVYIFTWMGDKVVNTISAILLQRGFKAGTYAGVI
EVEMASIDDVAQCLQSTVKTGLPTEAELAKMVDEKLIEKYDEYLPDELLCEGYGYRAFDC
VKAEAYLTKLVM
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgatggatgaataccaacgtctcgacacccgtatccaaaagtgggtattcaaacagggg
tggtctgatttaagagaaattcaaaagcgtgccattaacccgattttatctggtgatcga
gatgtgttgattagtgcctctactgcagcgggtaagactgaggcattttttcttcccgcc
tgtagcgcaactgcagatatggaacaaggttttggtattctctatataagccctcttaaa
gctcttattaatgatcagtaccgtcgattagaaagtctttgtgaagagctagatatgcca
gttacatcttggcatggtgatagctcacagtcgaaaaagaaaaaggcaaagaaaacaccc
tccggcattttacttataacacctgagtcattggaatcgttgcttgtaagagatgctggc
tgggtacaacaagcttttggctttcttaaatacattgttattgatgagtttcatgtattt
attggttcagatcgaggactgcatttactttcattattgaataggctagagcacctgctg
aaaaggtactcatctccaattcctcgagtggcattaagtgcaacacttggtgagttagat
caagttccgttgtccttgagaccgaataagagcatgccatgtgaaattataactagtagt
aaaagccacacaacacttaaagtccaggtacgtggttatatagagcccttggacttacag
tctgatgatttacgagactcggctgaagatcaaatttgcaaagaattatatagattatgt
agaggtagctctcatttggtatttgcaaatagtcgtaaaagaactgaaagtattgccgct
caactgagtgatttatgcgaggctaacattgtccccaatgaatttttcccacatcacggt
tcgctgtctaaagagcttcgggaagagctggaagctcggttacaaaaagaaatgttacca
acgacagctgtgtgtaccatgacgcttgaattaggaatcgatatcgggaaagttaattcg
gttgttcaggtcacggctccgcattctgtttctagtcttcggcaacgaatggggcgttct
ggtagaagaaattctccggctattcttcgtatgttaatctctgaagatgagcttactaaa
agctctagtattatcgacaaacttagaatggagctggttcaatctctggcaatgattcga
ttgctaattgccagtaaatggtttgaacctgctgatacaagtcaaatgcacttttcgacg
ttattgcaccaagttctagctgtaacagctcagtggggggggatacgagcagatcagctt
tatacgttactctgcacgaatggccccttccaaaagacaactatccaacattttaagctg
ttgctatcccatatgggcttttgtgaactattgacccagctatcgagtggcgaacttgtg
cttggtattcagggagagcggttagtaagtcaatatactttctacgcagtgttcaaaaca
ccagaagagtttcgtgtcgtggtcggtaataaaaccctaggtacattaccaatagactcg
gtcgtcatccagggacagcacattatttttggtgggtgccgctggaaagtactcgatgta
gatagcgataagaaagtaattcatgtcgaagctactaaaggtggaaagcctccatctttt
ggtggagaagggatgtctattcatgatgttgttcgtcaagagatgttccaaatatattgt
gagggtgattatctcatacaagttggtcatggaaaggtcgattacatagacactgtagcg
aagggcctttttaaggaaggtgcatgttactttaaggatagtaagctagagtcaaaatca
attattcagcagggacagtacgtttatatatttacctggatgggtgataaagttgttaat
acgatatctgcaatccttttgcaacgtggtttcaaagccggtacgtatgctggagtgata
gaggttgagatggcttctattgatgatgtagcccaatgtttgcaaagtactgttaagact
ggattaccaacagaagcagagttggcgaaaatggttgatgaaaagctgatagaaaaatat
gatgagtacttacctgatgaactactttgtgaaggttatggctatcgtgcttttgattgc
gtaaaagcagaggcttatttaactaaattagttatgtaa

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