Photobacterium profundum: PBPRA1855
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Entry
PBPRA1855 CDS
T00173
Symbol
VV12600
Name
(GenBank) Putative spermidine/putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
ppr
Photobacterium profundum
Pathway
ppr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PBPRA1855 (VV12600)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRA1855 (VV12600)
Transporters [BR:
ppr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
PBPRA1855 (VV12600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
MTD
ComC
Motif
Other DBs
NCBI-ProteinID:
CAG20259
UniProt:
Q6LR17
LinkDB
All DBs
Position
1:2137833..2138864
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AA seq
343 aa
AA seq
DB search
MKKWSALFTGAACAAAMFTTTANAANKELVFMNWGPYISTELREQFTKETGIKVIYSTYE
SNETMYAKLKTHPQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLTNFDELDENYLNKPFDP
NNDYSMPHVVAMTGLAVNTDMYDPADFDSWADLWDPKFKGQLMLMDDTREVFHIALRKLG
YSGNTTDPKQIDEAKEELKKLMPNVLVFNSDNPAAPYLAGEVGLGMLWNGSAAAAQKEGL
PIKLIWPKEGGIFWVDSLAIAKNAQNVEAAHRMIDFLLRPEIAAKISEETGYLTAVKASN
AKYKDDPTLFPPQEDLDRGEWQDSVGNMNIRYENYFLELKASQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatggtctgctttatttactggtgctgcatgtgcagccgctatgtttactaca
acagcaaacgcagcaaataaggaattagtctttatgaactgggggccgtatatttctacg
gaacttcgagaacagttcacgaaagaaactggtattaaagtcatttattcgacttacgaa
tcgaatgaaacaatgtacgctaagttaaaaacacacccacaaggttacgacttggttgta
ccttcaacatatttcgttgcaaagatgcgtgacgaaggtatgttgcagaaaattgataaa
tcaaagctgaccaattttgatgaattagatgaaaactatctaaataagccttttgaccca
aacaatgattactctatgccgcatgtggtcgcaatgacaggcttagccgtaaataccgat
atgtatgatcctgccgattttgatagctgggctgacttatgggacccaaaatttaaaggt
caattaatgctaatggatgacacacgcgaagtcttccatatcgcattacgcaaactgggc
tattctggtaacacgacagatccgaagcaaattgatgaagcaaaagaagagctgaaaaag
ctgatgcccaatgtcttagtctttaattcagataaccctgctgcaccctatttagctggt
gaagttggcttaggtatgctttggaatggctctgccgctgctgcacagaaagaaggttta
cctattaagttaatttggccaaaagaaggcggtattttttgggttgatagtttagcaata
gctaaaaatgcacaaaatgttgaagcagctcatagaatgatcgactttttacttcgccca
gagattgctgcgaaaatctctgaagaaaccggttatttaaccgcggttaaagcatctaac
gcaaaatacaaagacgaccctactcttttcccaccgcaagaagatttagaccgtggtgag
tggcaagattcggttggcaatatgaacatccgttatgaaaattactttcttgaactaaaa
gctagccaataa
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