Photobacterium profundum: PBPRA1861
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Entry
PBPRA1861 CDS
T00173
Symbol
RS01174
Name
(GenBank) putative formate dehydrogenase, iron-sulfur subunit
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
ppr
Photobacterium profundum
Pathway
ppr00630
Glyoxylate and dicarboxylate metabolism
ppr00680
Methane metabolism
ppr01100
Metabolic pathways
ppr01120
Microbial metabolism in diverse environments
ppr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PBPRA1861 (RS01174)
09102 Energy metabolism
00680 Methane metabolism
PBPRA1861 (RS01174)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_7
Fer4_11
Fer4_10
Fer4_6
Fer4
Fer4_9
Fer4_21
Fer4_2
Fer4_16
Fer4_8
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
CAG20265
UniProt:
Q6LR11
LinkDB
All DBs
Position
1:complement(2144014..2144631)
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AA seq
205 aa
AA seq
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MARMKFLCDSKRCIECNGCVTACKNENDDALEWGIQRRRVVTLNDGEPGETSISVACMHC
SDAPCMAVCPADCFEQTEDGIVRHDKDLCIGCGYCLFACPFGAPQFPKEDAFAERGKMDK
CTFCAGGPGVEPGSIEEKQKYGANRIAEGKLPMCASLCSTKALLAGDAAKISDIFRERVV
ARGAKEAGWANVDDLAYDASKEQNA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtatgaaatttctttgtgactctaagcgttgtatcgagtgcaatggttgtgtt
accgcatgtaagaatgaaaacgatgatgcactagagtggggtattcaacgtcgacgcgtt
gtaacccttaatgatggtgaacccggcgaaacgtcaatttctgtcgcttgtatgcattgt
tctgatgcgccatgcatggcggtttgtccggcagattgttttgaacaaactgaagacggt
attgttcgtcacgataaagacctttgcatcggttgtggttactgcttgtttgcttgtcct
tttggtgctcctcagtttcctaaagaggatgcctttgctgaacgtggcaagatggataag
tgtactttctgtgcaggtggtcccggcgttgaaccaggctcgattgaagagaaacaaaaa
tacggtgcaaaccgtattgccgaaggtaagttacctatgtgtgcatcgctttgttcaaca
aaagccttgctagcaggtgatgccgctaaaatctctgacattttccgtgagcgtgtagtt
gcacgtggtgcgaaagaggcgggttgggccaatgttgatgatcttgcatacgatgcaagc
aaagaacaaaacgcctaa
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