Photobacterium profundum: PBPRA2737
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Entry
PBPRA2737 CDS
T00173
Symbol
YPO2168
Name
(GenBank) putative exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBPRA2737 (YPO2168)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA2737 (YPO2168)
Enzymes [BR:
ppr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PBPRA2737 (YPO2168)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PBPRA2737 (YPO2168)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
TRY5_TPR
Motif
Other DBs
NCBI-ProteinID:
CAG21109
UniProt:
Q6LNL7
LinkDB
All DBs
Position
1:3174764..3175570
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AA seq
268 aa
AA seq
DB search
MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDDAFPLADVEAMGYKVYHHGQK
AHYGVAMLCKQEPVNIQKGFPTDDEDAQRRMIMATFEQEDGKKVTVLNGYFPQGENLSHE
TKFPAKEKFYADLMNYLNTHHTNEEEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSF
QLIEREWLKTLMDWGFTDTFRQLHPDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAA
RCIDAGIDYELRGIEKPSDHAPIWSTFK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatctcatttaatattaatggtcttcgcgctcgtcttcaccaacttcaagct
ttgattgaaaagcaccaacccgatgtgattggtcttcaagaaatcaaagtacatgatgac
gcttttccccttgctgacgttgaagccatgggctacaaagtttaccaccatggtcaaaaa
gcccattacggtgtggcgatgctatgtaaacaagagcccgttaatattcaaaaaggattt
ccaactgatgatgaagatgcacaacgtcgcatgatcatggcaacctttgagcaggaagat
ggtaaaaaagtcacggtgttaaatggctatttcccacaaggtgaaaacctgagccacgaa
acaaaattcccagcgaaagaaaaattctatgctgatttaatgaattacttgaacactcac
cacactaacgaagaagaagtgatcgtgatgggtgacattaatattagtccgattgactta
gatatcggtatcggccctgccaatgccaagcgctggttaaaaaccggaaagtgttcattt
cagctgattgaacgtgaatggctaaaaaccttaatggactggggattcaccgatacgttc
cgccagttacaccccgacgtagatgatcaattctcatggttcgactatcgctcaaaaggt
tttgttgataaccgtggtttacgtattgatgttgtacttgctacaccatcgcttgctgcg
cgttgtattgatgctggcattgattacgagttacgtggtattgagaagccatctgatcac
gcacctatatggtcaacatttaaataa
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