Photobacterium profundum: PBPRA2746
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Entry
PBPRA2746 CDS
T00173
Symbol
SPYM3_11
Name
(GenBank) hypothetical peptidase, M20/M25/M40 family
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00300
Lysine biosynthesis
ppr01100
Metabolic pathways
ppr01120
Microbial metabolism in diverse environments
ppr01230
Biosynthesis of amino acids
Module
ppr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBPRA2746 (SPYM3_11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppr01002
]
PBPRA2746 (SPYM3_11)
Enzymes [BR:
ppr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PBPRA2746 (SPYM3_11)
Peptidases and inhibitors [BR:
ppr01002
]
Metallo peptidases
Family M20
PBPRA2746 (SPYM3_11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CAG21118
UniProt:
Q6LNK8
LinkDB
All DBs
Position
1:complement(3184176..3185543)
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AA seq
455 aa
AA seq
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MKAKIASNIDGMRDEYIEAVKRLVAIPSVYDEATSSEQDQVPFGQPIDDCLTQTLALCQQ
MGFSVYKDPDGYYGYADIGQGEQMIGVLGHLDVVPVGDLSTWDSLPFEPEIRDGRLYGRG
TQDDKGPTLAALFAVKALLQSGVVLTKRIRFIFGTDEETLWRCIERYLEKEEIPQCGFTP
DASFPLIHAEKMLIQSWLHGDGDPSLFLECGGALNAVPELARYQGLLSDSLVGALDELGF
DFSCEDDEVTVFGKAAHSASADTKGVNAITRLCIALRKVGVTHPLVVFIAEQIGQDANAT
NIFGDIKDVSGRLTFNVAQLDISKEHSKSGIDIRVPVTFSKEDFDNDILAVVEQYGLHYE
EFDVLPSLYMPKDSAIIQTLMRAYQEISGDVDSKPMTSGGATYARAMPNCVAFGAIFPGR
DKVEHMPNEYLIIDDMLKAMNVYANAIHQLQGVEL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaaaatagcgtcaaacatagatggtatgcgcgatgagtatatcgaagcagtt
aagcggctggttgccattccgagtgtttatgatgaggcaacatcatcagaacaagatcaa
gtaccgtttggtcaacctattgatgattgtctaacgcaaactttggcactatgccaacag
atgggtttctcggtgtataaagatcccgatggttattacggctatgccgatattgggcaa
ggcgagcaaatgatcggggtgctgggccaccttgatgttgtacccgttggtgatttatcc
acatgggattcactgccttttgagcctgaaattcgagacggacgtttatacggtcgaggc
acacaagatgataaaggcccaacgcttgcagctttatttgcggttaaagctttactgcaa
agtggtgtggtattgacgaagcgaattcgctttatttttggtactgatgaagaaacattg
tggcgttgtattgaacgttacttagaaaaagaagaaattcctcagtgtggcttcacacct
gatgccagtttccctttgatccatgctgaaaaaatgctgattcaatcgtggttgcatggt
gatggtgacccgtcgctatttcttgagtgtggcggagcattaaatgccgttcctgaatta
gcacgataccaaggtctgttaagcgatagcttagtgggtgcacttgatgaactcgggttt
gattttagctgtgaagacgatgaagttaccgtctttggtaaagctgcacattctgcctct
gccgatactaaaggcgtcaatgctatcactcgtttgtgtatcgcattgaggaaagtcggt
gtgactcatcctcttgtagtctttattgctgaacaaattgggcaagatgctaatgctaca
aacatctttggggatatcaaagatgtgagtggtcgtctaacgttcaatgttgcgcagtta
gatatatcgaaagagcacagtaaatcggggattgatattcgtgttcccgttacttttagt
aaagaagatttcgataacgatattttggctgtggttgaacagtatggcttacattatgaa
gagtttgacgtattgccttctttatatatgccaaaagatagcgcgatcattcagacattg
atgcgcgcttatcaagaaataagtggtgatgttgacagtaagccgatgacgtctggtggg
gcaacgtatgctcgagccatgcctaattgtgtggcgtttggcgctattttcccagggcgc
gataaagttgaacatatgccaaatgaatacttaatcattgatgacatgctcaaggcgatg
aatgtctacgccaatgcaattcatcagctgcaaggagtggagttatga
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