Photobacterium profundum: PBPRA2917
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Entry
PBPRA2917 CDS
T00173
Symbol
PLU0943
Name
(GenBank) Putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03030
DNA replication
ppr03430
Mismatch repair
ppr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBPRA2917 (PLU0943)
03430 Mismatch repair
PBPRA2917 (PLU0943)
03440 Homologous recombination
PBPRA2917 (PLU0943)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppr03032
]
PBPRA2917 (PLU0943)
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA2917 (PLU0943)
Enzymes [BR:
ppr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBPRA2917 (PLU0943)
DNA replication proteins [BR:
ppr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBPRA2917 (PLU0943)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBPRA2917 (PLU0943)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
CAG21260
UniProt:
Q6LN66
LinkDB
All DBs
Position
1:complement(3350149..3350889)
Genome browser
AA seq
246 aa
AA seq
DB search
MNATMKATNQRIIVLDTETTGMNMTGPHYEGHCIIEIGAVEIINRKLTGNSFHVYIKPDR
TIEVEAIGVHGITDEFLIGKPVYKEVHDEFLEFIKGAELVAHNAPFDVGFMDYEFRKLNP
NIGKTEDFCKVTDTLAMAKKIFPGKRNNLDILCSRYGIDNSHRTLHGALLDAEILADVYL
LMTGGQTSLALSAEREDRDAGTESEIKRIASGRKLLKVLHASADEIEAHESRLDIISKKS
DVMWRQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccactatgaaagccactaaccaaagaattattgtactcgatactgaaacaacc
ggtatgaatatgacaggtcctcattatgaagggcattgcattattgaaatcggtgcggtt
gagatcatcaaccgtaaactgaccggaaatagtttccatgtttatatcaaacccgatcga
accattgaggtggaagcgataggtgttcacggtattacagatgaatttctaattggtaag
cctgtttataaagaggttcatgacgaatttctagaattcatcaaaggcgctgagcttgtt
gcccataacgcgccctttgatgtcggctttatggattatgaattcagaaagctaaatcca
aatatcggtaaaacagaagatttctgtaaagtgaccgatacgttggcaatggcgaagaag
atcttccctggcaaacgtaataatcttgatatcctttgttcgcgctatggtatcgataac
tcgcaccgaacgcttcacggcgcattactcgatgccgagatcttggctgatgtatacctg
ttaatgacaggtgggcaaacatctctcgcattaagtgctgaacgtgaagatcgtgatgct
ggtacagaaagtgaaattaagcgtatcgcttctgggcgtaaattattaaaggttttgcat
gcctctgccgatgaaatagaagcgcacgaatcgcgtttggatattatcagtaaaaagagt
gacgtcatgtggcgtcagtag
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