Photobacterium profundum: PBPRA3075
Help
Entry
PBPRA3075 CDS
T00173
Name
(GenBank) hypothetical hydrogenase subunit
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppr03016
]
PBPRA3075
Enzymes [BR:
ppr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PBPRA3075
Transfer RNA biogenesis [BR:
ppr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PBPRA3075
Prokaryotic type
PBPRA3075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CAG21391
UniProt:
Q6LMT5
LinkDB
All DBs
Position
1:complement(3513327..3514397)
Genome browser
AA seq
356 aa
AA seq
DB search
MSDNMLNVMDKFCWLYEKPTCQGQIKALPEHFIVKENLGFEFAGKGEHFMVKIRKVGENT
KYVVNELAKACGVKSRDVSWAGLKDRHAVTEQWISVHLPGKADPDLTDFVAEHPGIEVLE
TTRHDKKLRPGDLVGNWFQIRLLDLTNPEELALKLEQVKMHGVPNYFGQQRFGHGGNNVI
KARSWGNDEFRLRDKSKRSFYLSAARSWLFNMVLSTRIEQGSVNSLMVGDCLQNAGEDNC
FLAESITEELQASIDKGLVNITAPLVGDNALPTAADAEAFELAIIANEPSLLKLICDNRM
RHERRTLLLKPQEMEWQFDGNDVVLSFALPAGCFATSVVRELLVEQEGSTHANIDQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataatatgctgaatgtaatggataaattttgttggctatatgaaaaaccaaca
tgtcaggggcaaattaaagcactgccagagcattttatcgtaaaagaaaatttaggcttt
gagttcgcaggcaaaggcgagcacttcatggtaaagatccgcaaagtgggtgaaaatacc
aaatatgtagtgaatgaacttgcgaaggcttgcggtgttaaatctcgagatgtgagctgg
gccggtcttaaagatcgccatgctgtgactgagcaatggatcagtgttcacttgccgggt
aaggcagatcctgatttaacggattttgttgctgagcatccaggtattgaagtactagaa
acaacacgtcatgacaaaaaattacgaccgggtgatcttgttggtaactggtttcagatt
cgtttactcgatctaaccaaccctgaagaattagccctaaaactagaacaagtaaaaatg
cacggtgtgccaaattactttggtcagcaacgttttggtcacggtggtaataatgtgatt
aaagcacgcagctggggcaatgacgagttccgcttacgtgataaaagcaagcgcagtttt
tacttgtcagccgctcgttcatggctatttaatatggtgttatcaacccgtattgaacaa
ggcagcgtgaattcgctaatggttggtgattgccttcaaaatgccggcgaagacaattgc
ttccttgccgaatctattaccgaagaattgcaagctagtattgataaggggcttgttaac
attactgcaccgttagtgggcgataatgcattgccgacagctgcagatgcagaggctttt
gagttagccattattgctaatgaaccttcattactgaagttgatctgtgataatcgaatg
cgccatgaacgtcgtactttattactgaaaccgcaagagatggaatggcagtttgatggc
aatgatgttgtattatcatttgcgttacctgctggctgttttgcgacgtcagtagtcaga
gaattacttgtcgaacaagaaggtagtacgcatgcgaatattgatcagtaa
DBGET
integrated database retrieval system
