Photobacterium profundum: PBPRA3087
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Entry
PBPRA3087 CDS
T00173
Name
(GenBank) putative DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ppr
Photobacterium profundum
Pathway
ppr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PBPRA3087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA3087
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PBPRA3087
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PBPRA3087
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF6269
AA_permease
Motif
Other DBs
NCBI-ProteinID:
CAG21403
UniProt:
Q6LMS4
LinkDB
All DBs
Position
1:complement(3528194..3528904)
Genome browser
AA seq
236 aa
AA seq
DB search
MEGLQRCFVLHYRPYSETSLILDVFSEDYGRLTILSKGARRKRSNLKGTLQPFTPLFMKW
TGRGSMKTLTHAEPISISLPMRGYILYSAFYLNEVLVRVLENDTPYPVLFMDYLNALREL
AQADNPEPALRRFELALLHHLGYGIDFLHCAGSGLPIDDLMTYHYREQKGFIASMMTGHF
TFTGNQLLAIAARRFETPDQLKAAKRFTRIALKPYLGGKPLKSRELFIPRTRNIGK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaggggctacagcgttgttttgtccttcactatcgtccatatagtgagacgagtctg
atccttgatgttttcagtgaggattatggccgtcttactattttgtcgaaaggtgcgcga
cgaaagcgttccaatctaaaaggcacccttcagccttttacccctctgtttatgaagtgg
accggccgtggatcaatgaaaacattgacccacgccgagcctattagtattagtctgcct
atgcgcggctacattctctattcggcattttaccttaacgaggtattggtccgagtgctt
gaaaacgacaccccttatcctgtgctgtttatggattatttgaatgccttacgtgagtta
gcgcaagcggataacccagagcctgcattgcgacgcttcgaattagccttattgcatcac
cttggttatggcattgattttcttcattgtgctggtagtggtttaccgattgatgatctt
atgacgtatcactatcgagagcaaaaaggtttcattgcttcaatgatgaccgggcacttc
acttttactggtaatcaattactggcaattgctgctcgacgctttgaaaccccagatcag
ctcaaggccgcaaaacgctttacacggatagccttaaagccgtatcttggcgggaaacca
ttaaaaagtagggagttgtttatccctcgaacaaggaatatcggaaaatga
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