Photobacterium profundum: PBPRA3154
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Entry
PBPRA3154 CDS
T00173
Symbol
ECS3837
Name
(GenBank) putative A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBPRA3154 (ECS3837)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA3154 (ECS3837)
Enzymes [BR:
ppr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PBPRA3154 (ECS3837)
DNA repair and recombination proteins [BR:
ppr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PBPRA3154 (ECS3837)
Prokaryotic type
PBPRA3154 (ECS3837)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
MSC
DUF7495
Motif
Other DBs
NCBI-ProteinID:
CAG21469
UniProt:
Q6LMK8
LinkDB
All DBs
Position
1:3587579..3588538
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AA seq
319 aa
AA seq
DB search
MLQQTQVATVIPYFERFMERFPTVQDLAAAEQDEVLHLWTGLGYYARARNLHKAAQIIVS
EHNGMFPTDIDQVQALPGIGRSTAGAVLSLSLKQHHAILDGNVKRTLARCYAVEGWPGKK
PVENALWEIAEKNTPDSGVERYNQAMMDMGAMICTRSKPKCELCPIEAMCEAKAQLRQTD
FPGKKPKKVMPEKQTWFAILQHGDEVWLEQRPPVGIWGGLWCFPQHDTDDLRALVTQRIG
SESHIAETEQLHAFRHTFSHYHLDIVPIRMQLSTLMNVVQESGKGQWYSLTTPPKVGLAA
PVQQILEDLRYELNHSKTL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcaaacccaagttgccactgtgatcccttattttgaacgtttcatggaacgt
tttccgacagtgcaagatttagcggctgccgagcaagatgaggtattacacctttggact
gggcttggttactacgctcgcgctcgaaatcttcataaagccgcacaaattatcgtatct
gaacacaatggtatgttccctacagacattgatcaggtacaagccctacccggtattggt
cgatccacggcaggggctgttctgtcgttatcactcaagcaacatcacgcaattttagat
ggcaatgtaaaacgtacattagcgcgttgttatgcagtagaaggttggcccggtaaaaag
ccagtagaaaatgcattgtgggaaatcgcagaaaaaaacacacctgattcaggagtagag
cgttacaaccaagcaatgatggatatgggggcaatgatttgtacccgcagcaagccaaaa
tgcgaactgtgccctattgaagcaatgtgtgaagcaaaagcacaactgcgccaaaccgac
tttccgggtaagaagccaaagaaagtgatgccagaaaaacaaacctggtttgctattttg
caacacggcgacgaagtctggttagagcagcgtccacctgtcggaatatggggcggatta
tggtgctttccacagcatgataccgatgatttaagagctttagtcacacagcgtattggc
tcagaaagccacattgctgaaacagagcaactgcatgctttccgccatacctttagtcac
taccaccttgatatcgtgccgattcgcatgcaattatctaccctgatgaatgtggttcaa
gaaagcggaaaaggtcaatggtatagcttaaccacaccaccaaaagtagggttagcagcg
ccagtacaacaaatacttgaagacctgcgttacgagctcaatcactcaaaaacactataa
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integrated database retrieval system
