Photobacterium profundum: PBPRA3289
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Entry
PBPRA3289 CDS
T00173
Symbol
SSB
Name
(GenBank) putative single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
ppr
Photobacterium profundum
Pathway
ppr03030
DNA replication
ppr03430
Mismatch repair
ppr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBPRA3289 (SSB)
03430 Mismatch repair
PBPRA3289 (SSB)
03440 Homologous recombination
PBPRA3289 (SSB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppr03032
]
PBPRA3289 (SSB)
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA3289 (SSB)
03029 Mitochondrial biogenesis [BR:
ppr03029
]
PBPRA3289 (SSB)
DNA replication proteins [BR:
ppr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PBPRA3289 (SSB)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PBPRA3289 (SSB)
TLS (translesion DNA synthesis) factors
Other SOS response factors
PBPRA3289 (SSB)
Mitochondrial biogenesis [BR:
ppr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
PBPRA3289 (SSB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
DUF3127
CCDC53
Lin-8
Motif
Other DBs
NCBI-ProteinID:
CAG21594
UniProt:
Q6LM83
LinkDB
All DBs
Position
1:complement(3726755..3727318)
Genome browser
AA seq
187 aa
AA seq
DB search
MELSMASRGVNKVILVGNLGNDPEIRYMPSGSAVANITIATSESWRDKATGEQREKTEWH
RVALFGKLAEVAGEYLRKGSQVYIEGQLQTRKWQNQQGQDQYTTEVVVQGFNGVMQMLGG
RQGGGQQQQQQQQQGNWGKPQQPAAAPQQSVAPQQQQQAPQQPQQAPQQPQQQYNEPPMD
FDDDIPF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttggagttaagtatggccagtcgtggtgtaaataaggttatcttagtcggtaacttaggt
aatgacccagaaatccgttatatgccaagtggtagtgcagtagcaaacataacaattgct
acctctgaatcatggcgtgataaggcaacgggcgagcaacgtgaaaaaacagaatggcac
cgtgtggcgctgttcggtaagcttgctgaagttgctggtgaatacttgcgtaaaggttca
caggtatacatcgaaggtcaattacaaacacgtaaatggcaaaatcagcaaggccaagat
cagtacacaacagaagttgttgttcagggctttaatggcgtaatgcaaatgctaggcggt
cgtcaaggcggcggtcagcagcaacaacaacagcaacagcaaggtaactggggtaaacct
caacaacctgcagctgctcctcagcagagcgttgcacctcaacaacagcaacaggctcct
cagcaaccgcagcaggctcctcaacagcctcagcagcagtacaatgagcccccaatggat
tttgatgatgatatcccattctag
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integrated database retrieval system
