Photobacterium profundum: PBPRA3387
Help
Entry
PBPRA3387 CDS
T00173
Symbol
GROEL
Name
(GenBank) putative chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBPRA3387 (GROEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppr03019
]
PBPRA3387 (GROEL)
03110 Chaperones and folding catalysts [BR:
ppr03110
]
PBPRA3387 (GROEL)
03029 Mitochondrial biogenesis [BR:
ppr03029
]
PBPRA3387 (GROEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppr04147
]
PBPRA3387 (GROEL)
Enzymes [BR:
ppr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PBPRA3387 (GROEL)
Messenger RNA biogenesis [BR:
ppr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PBPRA3387 (GROEL)
Chaperones and folding catalysts [BR:
ppr03110
]
Heat shock proteins
HSP60 / Chaperonin
PBPRA3387 (GROEL)
Mitochondrial biogenesis [BR:
ppr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PBPRA3387 (GROEL)
Exosome [BR:
ppr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PBPRA3387 (GROEL)
Exosomal proteins of other body fluids (saliva and urine)
PBPRA3387 (GROEL)
Exosomal proteins of breast cancer cells
PBPRA3387 (GROEL)
Exosomal proteins of colorectal cancer cells
PBPRA3387 (GROEL)
Exosomal proteins of bladder cancer cells
PBPRA3387 (GROEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
CAG21672
UniProt:
Q6LM06
LinkDB
All DBs
Position
1:complement(3830626..3832278)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIIAEGLKAVAAGMNPMDLKRGI
DKAVIAAVAALKELSVPCEDTKAIAQVGTISANADATVGNLIAEAMEKVGRDGVITVEEG
QALHDELDVVEGMQFDRGYLSPYFINNQEAGSIDLESPFILLVDKKVSNIRELLPALEGV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKSMLQDIAVLTAGTV
ISEEIGLELEKVQLEDLGQAKRITITKENTTIIDGAGEETMIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVQDALHATRAAVEEGVVAGGGVALI
RAASKVAASGLEGDNEEQNVGIRVALRAMESPLRQIVKNAGDEDSVVANNVRAGEGNYGY
NAATGVYGDMIAMGILDPTKVTRSALQFAASVAGLMITTEAMITDMPAKDASAMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggcaatgacgctcgaattaaaatgctagaaggtgta
aacgttctggctgacgctgtaaaagtaacactaggtcctaaaggccgtaacgttgttcta
gacaaatcatttggcgcaccaacaatcacaaaagatggtgtttctgttgcacgtgaaatc
gaacttgaagacaagttccaaaacatgggcgcacaaatggtaaaagaagtggcttcgcaa
gcgaatgacgcggcgggcgacggaactacgacagcaacagtattggctcagtctattatt
gctgaaggtctaaaagctgttgctgctggcatgaacccaatggatcttaaacgtggtatc
gacaaagcggttattgctgctgttgcagcactgaaagagctgtctgtaccatgtgaagat
acgaaagctatcgcacaggtaggtactatctctgcaaatgctgatgcaactgtgggtaac
ctaattgcagaagcaatggaaaaagtaggtcgcgacggtgttatcactgttgaagaaggt
caagcactgcatgatgagcttgatgttgttgaaggtatgcagtttgaccgcggttacctg
tctccttacttcatcaataaccaagaagcgggttctattgatctagaaagtccattcatt
ctacttgtagacaagaaagtatcgaacattcgtgaactacttccagctctagaaggcgta
gcgaaagcgtctcgtccactgcttatcattgcagaagacgttgaaggcgaagcactagca
acattagttgtgaacaacatgcgtggcatcgtaaaagttgctgccgttaaagcacctggt
ttcggtgaccgtcgcaagtcaatgctacaagacattgctgtgctaacggctggtacggtt
atttctgaagaaatcggtctagagctagaaaaagtacaacttgaagatcttggtcaagcg
aagcgtattactatcactaaagaaaatacgactatcattgatggtgctggtgaagaaaca
atgattcaaggtcgtgttgctcaaattcgtcaacaaatcgaagacgcaacatctgactac
gataaagaaaaacttcaagagcgtgttgcgaaactggcaggcggcgttgctgttattaaa
gttggcgcggcaactgaagttgaaatgaaagagaagaaagatcgtgttcaagatgcacta
cacgcaacgcgtgcagctgtagaagaaggcgtggttgctggtggtggtgttgcactaatc
cgcgcagcatccaaagttgctgcttctggtcttgaaggcgacaacgaagagcagaatgta
ggtattcgtgttgcacttcgtgcgatggaatctcctcttcgtcaaatcgttaaaaatgcg
ggtgatgaagattcagttgttgctaacaatgttcgtgctggcgaaggtaactacggttac
aacgctgcaacgggtgtttatggtgacatgatcgcaatgggtattcttgacccaacgaaa
gtaacgcgttcagcacttcagttcgcagcatcagttgcaggtcttatgattactactgaa
gctatgattaccgatatgccagcgaaagatgcctctgcaatgcctgatatgggcggcatg
ggtggtatgggtggcatgggcggtatgatgtaa
DBGET
integrated database retrieval system
