Photobacterium profundum: PBPRA3402
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Entry
PBPRA3402 CDS
T00173
Symbol
PA3232
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03030
DNA replication
ppr03430
Mismatch repair
ppr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBPRA3402 (PA3232)
03430 Mismatch repair
PBPRA3402 (PA3232)
03440 Homologous recombination
PBPRA3402 (PA3232)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppr03032
]
PBPRA3402 (PA3232)
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA3402 (PA3232)
Enzymes [BR:
ppr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBPRA3402 (PA3232)
DNA replication proteins [BR:
ppr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBPRA3402 (PA3232)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBPRA3402 (PA3232)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAG21686
UniProt:
Q6LLZ2
LinkDB
All DBs
Position
1:3852759..3853382
Genome browser
AA seq
207 aa
AA seq
DB search
MNLLQRYWYQRKLKDNPYGQLFNRYQGDELVSVDCETTSLDPHSAELVTIAATVIKNNRI
LTSKSIHLTLRAPISLDANSITIHRIRHQDLRAGLGEKEALTTLLNFIGNRPLVGYHIRY
DKTILDRYYRRLFGFALPNKLVEVSHLYHDRLERLLPNAYYDLSLEAISRHLGLPVPERH
DALEDTITAALIYVRLKHGDFPTLRSA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaacctattacaacgttattggtatcagcgaaaattaaaagataacccttatggtcag
ctctttaatcgctatcagggtgatgaacttgtctctgtagattgtgaaaccaccagcctt
gatccgcacagtgcagagttggttaccattgcggcgaccgttattaaaaacaatcgtata
ctcaccagtaaatcgatccatttaaccctaagagcaccaatcagtttagacgctaattca
atcacgattcatcgcattcgccatcaagatttacgcgcaggattaggtgaaaaagaggcc
ttaaccacactgcttaattttattggtaatcgccctttagtgggttatcacattcgctat
gacaaaacgattttggatcgctattaccgacggttatttggttttgcattacccaataaa
ttggtagaggtgagccacctctaccatgaccgtttagaacggcttctgccgaatgcttat
tacgatctaagtttagaagccattagccgccaccttggccttccggtaccagagcggcat
gacgcgctcgaagatacgattactgccgctttgatttatgtacggctaaaacacggtgat
tttccgacgctccgttcagcgtaa
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