Photobacterium profundum: PBPRA3411
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Entry
PBPRA3411 CDS
T00173
Symbol
FIS
Name
(GenBank) putative factor-for-inversion stimulation protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppr03000
]
PBPRA3411 (FIS)
03036 Chromosome and associated proteins [BR:
ppr03036
]
PBPRA3411 (FIS)
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA3411 (FIS)
Transcription factors [BR:
ppr03000
]
Prokaryotic type
Helix-turn-helix
Other families
PBPRA3411 (FIS)
Chromosome and associated proteins [BR:
ppr03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PBPRA3411 (FIS)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PBPRA3411 (FIS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
HTH_30
Xre-like-HTH
CNOT1_HEAT_N
HetZ
Baseplate_J_C
MHB
DUF5805
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CAG21695
UniProt:
Q6LLY3
LinkDB
All DBs
Position
1:3862834..3863130
Genome browser
AA seq
98 aa
AA seq
DB search
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVDDLYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaatctgacttccgaagcgttaacagtaacaactgtaacgtcacaagac
caaatcacacagaagccactacgtgactctgttaaagcgtcgctaaaaaactatcttgct
cagttaaatggtcaggaagtcgacgatctgtacgagctagtgcttgcagaggttgagcaa
ccgctattagatacaatcatgcagtacacacgtggtaaccaaacacgtgcagcaaccatg
atgggtatcaaccgtggtacgcttcgtaagaagctaaagaaatacggcatgaactaa
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