Photobacterium profundum: PBPRA3522
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Entry
PBPRA3522 CDS
T00173
Symbol
DAPF
Name
(GenBank) putative ribulose-phosphate 3-epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00300
Lysine biosynthesis
ppr00470
D-Amino acid metabolism
ppr01100
Metabolic pathways
ppr01110
Biosynthesis of secondary metabolites
ppr01120
Microbial metabolism in diverse environments
ppr01230
Biosynthesis of amino acids
Module
ppr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBPRA3522 (DAPF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBPRA3522 (DAPF)
Enzymes [BR:
ppr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PBPRA3522 (DAPF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAG21793
UniProt:
Q6LLN5
LinkDB
All DBs
Position
1:complement(3981273..3982103)
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AA seq
276 aa
AA seq
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MQINFSKMHGLGNDFMVVDCVTQNVFFSPAAIRRLADRHRGIGFDQLLVVEPPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVWMKGLTNKYQVAVSTKAGKMLLKLENDNQVTVNM
GVPEFEPSKIPFRAKQTEKTYIMRVGERTIFCGTVSMGNPHCVTVVDDLELTDVDTLGPL
IESHERFPERVNAGFMQVVSRNEVKLRVYERGAGETQACGSGACAAVAVGYLQGLLDENV
KVSLPGGDLHISWAGEGKSLYMTGPVAHVFDGQIVL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcagattaatttttccaaaatgcatgggctgggaaatgacttcatggtggtggattgt
gtcacgcagaatgtatttttttcgcctgctgcaataaggcgcttagctgatcgtcaccgt
ggcattgggtttgaccagctattggtggttgagccaccttatgatcctgaaactgatttc
cattatcgtatttttaacgctgatggcagtgaagttgaacagtgtggcaacggtgcccgc
tgttttgcccgctttgtttggatgaaagggttaaccaataaatatcaagtggcggtaagt
accaaagccggcaagatgttattgaagttagaaaatgataatcaggtaactgtcaatatg
ggcgtgcctgagtttgaaccaagtaagatcccgtttcgcgctaagcagacagaaaaaacc
tacattatgcgagtgggtgagcgcaccatattttgtggcaccgtgagtatgggaaatcca
cactgtgtcaccgtggtcgatgatcttgaactgactgacgttgatacccttggaccattg
atagaatctcatgagcgcttccctgagcgtgttaatgccggtttcatgcaagtggtatcg
cgcaatgaggttaaattacgggtatacgaacgcggagcgggtgaaacgcaggcttgtggt
agtggcgcttgtgctgccgttgcggtgggttatcttcaaggtttgctggatgaaaatgtc
aaagtcagtttaccgggtggcgatttgcatattagctgggctggtgaaggcaaatcactg
tatatgactgggccagtggcacatgtttttgatggacaaatagtattatga
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