Photobacterium profundum: PBPRA3523
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Entry
PBPRA3523 CDS
T00173
Symbol
PSPTO022
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00300
Lysine biosynthesis
ppr00470
D-Amino acid metabolism
ppr01100
Metabolic pathways
ppr01110
Biosynthesis of secondary metabolites
ppr01120
Microbial metabolism in diverse environments
ppr01230
Biosynthesis of amino acids
Module
ppr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBPRA3523 (PSPTO022)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBPRA3523 (PSPTO022)
Enzymes [BR:
ppr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PBPRA3523 (PSPTO022)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAG21794
UniProt:
Q6LLN4
LinkDB
All DBs
Position
1:complement(3982140..3983390)
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AA seq
416 aa
AA seq
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MDYFNYQPNGQLWAEDIALTELAERYGTPLYVYSRATLERHWNAFDQAVIDHPHLICYAV
KANSNIGVLNVLARLGSGFDIVSQGELERVITAGGDPAKVVFSGVGKTAVEMKRALELGI
KCFNVESEPELERLNQVASELGLVAPISLRINPDVDAQTHPYISTGLRDNKFGIFFERAV
EVYRLAHSLPNLNVVGMDCHIGSQLTNIDPFIDATDRLLALIDTLKAEGIVIKHLDVGGG
LGVTYNEEQPPLPSEYASALLARLGEHSDLELIFEPGRAIAANAGVLLTRVEFLKHTDYK
NFAIVDAAMNDLIRPTLYQAWQNIVPVVPREGEAKTYDLVGPICETGDFIGKDRELCLAP
GDLLAVRSAGAYGFVMSSNYNTRTRAAEIMVDGNTAHVVREREKLAELWQSEHLLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttggattactttaactaccaaccgaacggccaattgtgggctgaagacatcgcattaacc
gagcttgctgaacgctatggtacgccattatatgtgtattctcgtgccacgcttgagcgt
cactggaatgcattcgatcaagcggtaatcgatcatcctcatctgatttgctatgcagta
aaagcgaactcgaatattggtgtactgaacgtgttagcacgattaggttcaggtttcgat
atcgtctctcaaggtgagcttgagcgtgttattaccgcgggtggtgatcctgccaaagtg
gtgttctctggggtgggtaaaaccgcagtagaaatgaagcgtgcgttagagttggggatt
aaatgtttcaatgttgaatctgaacctgaacttgaacgtttgaatcaggtggcgagtgaa
ctggggctagttgcaccgatttcattacgcattaaccctgatgttgatgcgcaaacgcac
ccttacatctctacgggcttgcgtgataataaattcggtatcttctttgagcgtgcggtt
gaagtctaccgattggcacatagcctacctaacttgaacgtagtgggtatggattgccat
attggttctcaactaaccaatatcgacccttttattgatgcgacagatcgcctattggcc
ttgatcgataccttgaaagcagaaggtattgtgattaagcaccttgatgttggtggtggc
ttaggcgtcacatataatgaagagcaaccgccgttgccgtctgagtatgcctctgcattg
ctagcacgcttaggtgagcattctgatctggagttgatctttgaaccgggtcgcgccatt
gcggcgaatgccggtgtattactgacccgcgtagaatttttaaagcacaccgattacaag
aacttcgcgattgtcgatgcggcaatgaatgacttgattcgccctaccttgtaccaagca
tggcaaaatattgtgccagtggtaccacgtgaaggtgaagccaaaacgtatgatttggtt
ggccctatctgtgaaacgggcgatttcattggtaaagatcgcgagctatgtcttgcccct
ggtgacttattagcggtgcgctctgcgggtgcttacggttttgttatgtcgtctaactac
aatactcgtactcgtgctgcagaaatcatggtcgatggtaataccgctcatgtggtacgt
gaacgtgaaaagcttgcagaactatggcaatctgaacatctattgccgtaa
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