Photobacterium profundum: PBPRB0080
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Entry
PBPRB0080 CDS
T00173
Symbol
RSC0132
Name
(GenBank) hypothetical bacterial regulatory helix-turn-helix protein
KO
K07506
AraC family transcriptional regulator
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppr03000
]
PBPRB0080 (RSC0132)
Transcription factors [BR:
ppr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PBPRB0080 (RSC0132)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Utp12
VHP
Motif
Other DBs
NCBI-ProteinID:
CAG21953
UniProt:
Q6LLD3
LinkDB
All DBs
Position
2:complement(104246..104713)
Genome browser
AA seq
155 aa
AA seq
DB search
MQIDESYQRRINKVCDYIYAHLDDELTVEDLSKVAHFSKYHFHRQFTHYMGIGVFKFIQQ
LRLKRASYQLFFHRDTRIIDIALDANFEYPESFSRAFKKVFAQSPSEFRHQSNWLQWHQK
YHYREIKLEKNMNVEIKHFQQVDVLLFGIMALIMA
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatagacgaaagttaccaaagaagaatcaataaggtgtgtgactatatatacgca
cacctagacgacgagttaaccgttgaagacctcagtaaagtcgctcacttctctaagtat
cactttcaccgccagttcacacactatatgggtattggtgtattcaaatttattcaacag
ctaaggcttaagcgcgcttcttatcagctttttttccatcgagacacgcgcataatcgat
atcgctcttgatgctaactttgagtacccagaatctttttcacgtgcattcaaaaaagta
tttgctcaatcgccttctgaatttcgccaccaatctaactggttgcaatggcatcaaaaa
tatcattatcgagagataaaattggagaagaatatgaatgttgaaataaaacactttcag
caggtcgatgtgctgttattcggcatcatggctctcataatggcttag
DBGET
integrated database retrieval system
