Photobacterium profundum: PBPRB0175
Help
Entry
PBPRB0175 CDS
T00173
Symbol
SMC01605
Name
(GenBank) putative periplasmic solute-bindingprotein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppr
Photobacterium profundum
Pathway
ppr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBPRB0175 (SMC01605)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRB0175 (SMC01605)
Transporters [BR:
ppr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PBPRB0175 (SMC01605)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
PurA
Motif
Other DBs
NCBI-ProteinID:
CAG22048
UniProt:
Q6LKW7
LinkDB
All DBs
Position
2:196365..197414
Genome browser
AA seq
349 aa
AA seq
DB search
MKQLIAGLTFAALTVSTAAQAQPNVEQLIKAAQKEGQVYSVGMPDGWANWKDTWADMAST
YGVKHQDTDMSSAQEIAKFAAEKKNATADIGDVGFAFGRVAVKKGVTQPYKPTTWADIPD
WAKDKDGHWMLAYTGTIAFIINKNLVKDAPKSWDDLVKGQYRVTVGDVGVAAQANNAVLA
AAFAKGGNEQNIKPALQLFGDLAKQGRLSLNDPSIANLEKGEVEVGIMWDFNALNYRDQI
DRSRFTVVIPSDGSVISGYTTIINKFAKNPNAAKLAREYILSDEGQINLARGYARPIRSS
ITLPDDVKAKLLPNEQYTNAKPISDFDRWEKTARKLPRQWQENVLIHMQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaactgattgctggccttacttttgctgcactgacggtaagcacggctgcacaa
gctcagcccaatgttgaacaactaattaaagcggctcaaaaagaagggcaagtttatagt
gtcggtatgcctgatggctgggcaaattggaaagatacctgggctgatatggcatcaacc
tatggtgtgaaacaccaagatacagacatgagctcagcacaagaaattgcaaaattcgct
gccgagaaaaaaaatgcgaccgctgatattggcgatgtgggctttgcctttggtcgagtc
gcggtgaaaaaaggggtaactcaaccttataaaccaaccacatgggcagacattccagat
tgggcgaaagataaagatggccattggatgctcgcatataccggtacgattgcttttatt
atcaataaaaatctcgttaaagatgcccctaaaagctgggacgatttggtgaaagggcaa
tatcgcgtcaccgtgggtgatgtgggtgttgcagcgcaagcaaacaatgcagtattagcg
gcagcctttgcaaagggtggtaatgagcaaaacattaaacctgcattacagctatttggt
gatctggcaaaacaaggccgtttatcattgaatgatccaagtatcgccaaccttgaaaag
ggtgaagtggaagtgggcattatgtgggatttcaatgccttgaactaccgtgaccaaatc
gaccgttctcgctttacggttgtaattccttctgatggctctgttatctcgggctacacc
accattatcaataagtttgcgaaaaaccctaacgctgccaagttagctcgtgaatatatt
ctgagtgatgaaggtcaaattaacttagcacgtggttatgcgcgtcctatccgttcatca
attactttacctgatgatgtgaaagccaagttattgcctaacgaacaatataccaatgcg
aagccaatctcagattttgaccgttgggaaaaaacagctcgtaaattgccgcgccaatgg
caagaaaacgttctaattcacatgcagtaa
DBGET
integrated database retrieval system
