Photobacterium profundum: PBPRB0404
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Entry
PBPRB0404 CDS
T00173
Symbol
VV20400
Name
(GenBank) hypothetical alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00500
Starch and sucrose metabolism
ppr01100
Metabolic pathways
ppr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PBPRB0404 (VV20400)
Enzymes [BR:
ppr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
PBPRB0404 (VV20400)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
DUF5696
Motif
Other DBs
NCBI-ProteinID:
CAG22277
UniProt:
Q6LKA3
LinkDB
All DBs
Position
2:complement(461655..463079)
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AA seq
474 aa
AA seq
DB search
MTSLFNTEYASTLSAPSVATNVILHAFDWPYSKVTESAKAIADSGYKAILVSPPLKSFHS
KDGTQWWQRYQPQDYRVIDNQLGNTNDFRKMAETLNLHDIDIYADIVFNHMANESHERND
LNYPNSNIISQYKDKREYFDSIKLFGDLSQPLFTKDDFLSAFPIKDWKDPWQVQHGRISS
GGSDPGLPTLKNNKNVVKKQKLYLKALKKIGVKGFRIDAAKHMTLDHIQELCDEDITEGM
HIFGEIITDGGATKEEYELFLQPYLEKTTLGAYDFPLFHTVLDVFNKNASMASLINPYSL
GSALENQRAITFAITHDIPNNDVFLDQVMSEENERLAYCYILGRDGGVPLVYTDLDTSGI
KSSRDKPRWCDAWNDPILANMIHFHNIMHCQPMAIIEQTQDLLVFSRGEHGVVAINKGKK
AVSYELPIKYSQQNRTEINEIINMEGVKLLPPSLGSETGAILQLPAQSCAMLVS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacttctctatttaatactgaatatgcatcaactttgtcagcaccatctgttgcaact
aatgttatattgcacgccttcgactggccttacagtaaagtgactgaaagcgccaaagcc
attgctgactctggatataaagctattcttgtttctccaccactgaaatcttttcattca
aaagatggcactcaatggtggcaacgttatcaacctcaagattatcgagtcatcgacaac
caactcggtaacacgaatgatttcagaaagatggcagaaacattaaatcttcatgatata
gatatttatgcagatattgtgttcaatcatatggctaatgagtcacatgaaaggaatgac
ttaaattaccctaatagcaatatcattagccaatataaggacaagagagaatatttcgat
tcaatcaaattatttggtgatttatctcaaccgttatttactaaagatgattttttatcg
gcatttccaataaaagattggaaagatccttggcaagttcagcacggtagaattagtagc
ggtggctctgatccgggtttaccgaccttaaaaaacaacaaaaatgtagtaaaaaaacaa
aaactgtacctaaaagcgctaaaaaaaatcggtgtgaaggggtttcgaatagatgcagcc
aaacatatgacacttgatcatattcaagagttgtgtgatgaagatattactgaaggcatg
catatttttggcgaaataattaccgacggtggcgcgaccaaagaagagtacgaactgttt
cttcagccttatcttgaaaaaacaaccttgggtgcctacgactttccactttttcacacc
gtacttgatgtttttaataaaaatgcttctatggcaagtctaatcaacccttactctctg
ggttcggcattagaaaaccaacgtgcaatcacatttgcgattactcatgatattcccaac
aacgacgtttttttagatcaggtaatgtcagaagagaatgaacgattagcctattgttat
attctaggtagagatggtggtgttccactcgtttataccgatttagatactagtggcatt
aaaagtagtcgtgacaaacctcgttggtgtgacgcttggaatgatccaattctggctaat
atgattcactttcacaacattatgcattgccaaccgatggcgattattgaacagactcaa
gatttattggttttttctcgtggagagcatggagtagtcgcgattaacaaaggtaaaaaa
gccgtcagttacgaacttccgataaaatacagtcaacaaaaccgtactgagattaacgag
attataaatatggagggagtgaaattattaccaccttcactcggcagtgaaactggggct
atattacaacttccggctcagtcatgtgcaatgctggtgtcataa
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