Photobacterium profundum: PBPRB0412
Help
Entry
PBPRB0412 CDS
T00173
Symbol
VV21226
Name
(GenBank) putative glycogen protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00500
Starch and sucrose metabolism
ppr01100
Metabolic pathways
ppr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PBPRB0412 (VV21226)
Enzymes [BR:
ppr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PBPRB0412 (VV21226)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
pulA_all-beta
DUF5316
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
CAG22285
UniProt:
Q6LK95
LinkDB
All DBs
Position
2:complement(473443..475392)
Genome browser
AA seq
649 aa
AA seq
DB search
MFAKLAQAYPLGATLCDQGCNFSIHSTDNQEIKLVLFDIENKKTIIDFDHTHLDIHYTFV
PNIKAGQVYGFQIKDKHNERLILDPYAQALNQTPFYVEPFTAEESWKFTKSVVIDHQFDW
QNTVFPQVPYEETILCETHVKGFTQLQEHIEEQYRGTYLGLCQPAAIEFYKEQGITSLQL
LPVTSCMSEPHLLKMDKVNFWGYNSLCFMAPEPRYAMSDAVTEMKTMVRELHKEGIEVIM
DIVFNHTAEGGEGGPKFHLKCLDKHYYLLDSNKNHHNYTGCGNTVDLTYQPSLTLVIDTL
RHWVTHYQIDGFRFDLAATLGRNGHRFDSQSAFFKAIEQDPILQKVKLIAEPWDVGPDGY
QLGNFPRGWNECNDKFRDTVKSHWLGDKNNIKEFATRLMGSRDFFSAGGWPDKLPVNFIS
YHDGFTLQDLVSYNHKHNEANGERNLDGHGDNRSFNHGVEGKTDNLSVLYKRERQKRNLM
TTLLFSFGIPHLLAVDSLSHTQGGNNNAYCQDNEISWANWILSPDNISFKNWLAGMVKAR
KEVMSPFIRAFSGRERGHHRIRWNHSNGKLMNTDDWQNLEAFALYLGLYKNGKELLFLIN
SSTIPTRYRLPAGGKWRIICDTSESVLGNRQTQTTYMQSTQSITILSRE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgaaattagctcaagcttatcctttaggggctacattatgtgatcaaggttgt
aatttttcaattcacagtactgataaccaagaaattaaattagttctattcgacattgaa
aataaaaaaacaattattgactttgaccatacacacttagatatccactataccttcgtt
cctaatattaaagcaggacaggtttatggctttcaaattaaagacaagcacaatgaaaga
ttaattctcgacccatatgcgcaggccctcaatcaaacacctttttatgtagaaccattc
acggcagaagaaagctggaaattcactaaatctgttgttatcgaccatcaatttgattgg
caaaacaccgtctttccacaggtaccgtacgaagaaaccatcctgtgtgaaacgcacgtt
aaagggtttactcagcttcaagagcatattgaagagcaatacagaggcacttaccttggc
ctctgccaacctgctgcaatcgagttctataaagaacaaggcattaccagcctacaattg
ctcccagtcacttcatgcatgtctgaaccccatttgcttaagatggataaagtgaatttc
tggggctataacagcctgtgctttatggcaccagagccgcgctatgcgatgagtgatgcc
gtcacagaaatgaagaccatggtaagggaattacacaaagaaggtattgaagtcatcatg
gatatcgtgttcaaccacactgcagaaggcggtgaaggtgggcccaaatttcatttgaag
tgcttggataaacattattaccttcttgatagtaataaaaatcatcacaactacacaggc
tgtggtaataccgttgatcttacttatcaaccaagcctaacccttgtaatcgatactctt
cgacactgggtaacccattaccaaattgatggtttccgctttgatttagcagcaacacta
ggacgtaacgggcatcgttttgactcccaaagtgccttctttaaagccattgaacaagat
ccaattttacaaaaggtaaaattgattgctgaaccttgggatgtaggtcctgacggctat
cagcttggtaatttcccgcgaggctggaacgagtgcaatgataaatttcgcgataccgtc
aagagtcattggctaggcgataagaacaatatcaaagaattcgcaactcgactaatgggg
tctcgcgatttcttcagtgcgggaggttggccagacaaattacccgtcaatttcatttcc
tatcatgatggttttacgctgcaagatcttgtgtcttacaaccacaagcacaatgaagca
aatggtgaaagaaaccttgatggacatggcgataatcgttcatttaaccacggggttgaa
gggaaaacagataacctgtcggttctgtataagcgcgaacgtcaaaaacgcaaccttatg
acaacgctactatttagctttgggattcctcatctacttgcagtagatagcctatctcat
actcaaggtggcaataacaatgcttactgccaagataatgagataagctgggccaactgg
atattatcacctgataatatcagcttcaaaaactggctagcaggaatggtaaaagccaga
aaagaagtgatgagtccgtttattcgggcattcagtggtcgtgaacgtggacaccaccgc
attcgctggaaccattcgaatggtaaactaatgaacactgatgattggcaaaaccttgaa
gcctttgctctctatcttggcctatataaaaatggtaaagagttgttattcctaataaat
agctcaacaattccaacgcgataccgtttacccgctggcggtaaatggcgtattatatgt
gatacctcagagtctgttcttggtaaccgtcaaacgcaaaccacctacatgcaaagtacc
caatcgatcacaatactctctcgagagtag
DBGET
integrated database retrieval system
