Photobacterium profundum: PBPRB0894
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Entry
PBPRB0894 CDS
T00173
Symbol
YBJD
Name
(GenBank) hypothetical ATP-dependent endonuclease of the OLD family
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PBPRB0894 (YBJD)
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Gene cluster
GFIT
Motif
Pfam:
DUF2813
OLD-like_TOPRIM
AAA_15
AAA_23
AAA_21
SMC_N
AAA_29
ABC_tran
AAA_27
Motif
Other DBs
NCBI-ProteinID:
CAG22766
UniProt:
Q6LIW4
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Position
2:complement(1032613..1034259)
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AA seq
548 aa
AA seq
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MHLERIEVSGFRGIKRLSLSFNQLSVLIGENAWGKSSLLDALSIALAVNTEFYTFKFSDF
HVDYALGHDKQTNIQIVLHWKEDFAGEHKARRYKAFSPTWVTRDGIKHLYYQLSATNQYD
KVTTERFFLDRNGTKIECEDTDKLVKHLMILHPVVRIRDARRLRDDTLEQAIQHSDEQAK
KLRIERRLDNTCRRLITQPGHVNSGELKSSVNALRTLVDHYFAFTPHNRSSHFNRVHFPS
YSQYGENPLEQLTQPQMSKQSRLVLMGLLNAYIRARGPVELKRISRPIMILEDPEGRLHP
TVLHQAWTFVDSMPMQKILTTNSPDLLSIVPLGSIKKLIRQPDRTQVFALNKNALSRDEE
RRISFHVRLHRPSALFARAWLLVEGETEVWLFNELARICGYNLAAEGVQVIEFAQSGLKP
LIKIARLMGIEWHLVADGDAAGRKYGETVKNLLGNDAERHRLTILPNRDIEHFLYHHGYE
QMFRDLARVKSDTPIPPQKIISRALKHYAKPDVALAIVKYTDESDIETIPLLIRWTLKRI
VAMSRGMG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcatttagaacgtattgaagtttctggttttcgaggcattaaacgcctgtcgctgtct
ttcaaccaattaagcgtactgattggtgaaaatgcttggggtaaatcatcactccttgat
gcattaagtattgcacttgctgttaataccgaattctacacatttaaattttctgatttt
catgtcgactacgcacttgggcatgataaacaaacaaatattcaaatagtcttacactgg
aaagaagatttcgctggagaacataaagcaagaagatacaaggcattctctcctacttgg
gttactcgtgacggcattaagcacttatattatcaactcagtgccacaaaccaatacgat
aaagtaacaacggaacgtttctttttagatcgcaacgggacaaaaatcgagtgtgaagat
acagataaacttgttaagcacttaatgattcttcaccctgttgtacgaattagagatgca
cgacggttacgtgatgatacgttagaacaagcaatacaacattctgatgaacaagccaaa
aaattacgtattgagcgtcgcctcgataatacctgtcggcgtttaattacacagcctggt
catgttaattcaggtgaactaaaaagcagtgtgaacgccctacgcacgcttgttgaccat
tactttgcttttacccctcataatagatcgagccactttaaccgtgttcatttcccaagc
tacagccaatatggcgaaaaccctttagaacaactgactcaacctcaaatgtctaaacaa
agtcgtcttgtcttaatgggcttattaaatgcgtatatacgtgcaagagggcctgtagaa
ttaaaacgtatttctcgcccaattatgatcttggaagatcctgaaggtcgtttgcatcca
acagtattacatcaagcatggacattcgttgacagtatgcccatgcaaaagatcctcaca
acgaatagccccgatcttttatcaatcgtgccacttggctctattaagaagttgatccgc
caaccagatagaacacaggtttttgctctcaataagaatgcactctcacgcgatgaagaa
cgccggatctcatttcatgttcgccttcaccgccctagtgcactctttgctcgtgcatgg
ttattagtcgagggagaaacagaagtatggctatttaacgaactcgcacgaatatgtggc
tataacctcgccgcagaaggtgtacaagttatcgaatttgcccagagtggattaaaacct
ttaatcaaaattgcccgtttaatgggaattgaatggcatttagtcgcagatggtgatgca
gcaggtcgaaaatacggcgagacagtaaagaatttactcggtaatgacgctgaacgacac
cgtttaaccattttacctaatcgcgatatagaacactttctttatcaccatggctatgaa
cagatgtttagagacttagcccgggtaaagtctgatacgccgattccccctcaaaaaatc
atatctcgcgcactgaagcattacgcaaaaccagatgttgccctcgctatcgtcaagtac
accgatgagtctgacatagaaacaatcccattactcatacgttggacattaaaacgaatc
gtcgccatgtcacgtggaatggggtga
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