Photobacterium profundum: PBPRB1001
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Entry
PBPRB1001 CDS
T00173
Symbol
VVA1228
Name
(GenBank) conserved hypothetical protein
KO
K26937
MATE family, multidrug efflux pump
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRB1001 (VVA1228)
Transporters [BR:
ppr02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
PBPRB1001 (VVA1228)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
CAG22873
UniProt:
Q6LIK7
LinkDB
All DBs
Position
2:complement(1140918..1142267)
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AA seq
449 aa
AA seq
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MYSQTVSSAPISQSELARQLFKMTWPMLFGVLSLLSFQLVDSAFIGQLGVLPLAAQGFTL
PMQMVIIGLQVGLGIATTSLISRVLGANEPERAKQLGGLVVITGGIGVFAICWLIWLLRG
PVLNLLDAPLNVYPVIDAYWPVWLGSSWTGAMLYFAYSLCRANGNTMLPGIMMVVTSILN
MLLDPLFIFTFDMGLVGAAWATIVAFGIGMLAVFPLVIKRHWMSFQFEGLDIPASIKELG
NIMAPAMLSQLLPPLSSMFATKLVASFGAATVAAWALGSRLEFFSIVVVLALTMSMPPMV
GRMLGEKDIHRIKSLVNISIKFLLGWQLAVAAVLFIASPYLAELLTSEESVRSVLLIHLT
WVPISLGSLGICMLMVSICNALALPMRALLISGLRLFVCFLPLLWLGTQLLGLNGLFIGA
MVGNFAAGIMAWVLYQQGINVAIRKYCTE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtattcacaaacggtatcatcagcgccaatctctcagtctgaacttgctcgtcagcta
tttaaaatgacatggccaatgctatttggcgtactttcgttgttgagttttcagcttgtt
gatagtgcgtttatcggtcagctcggtgtactacctcttgcggctcaagggtttacctta
ccgatgcaaatggtgattattggtcttcaagtcggtttaggtattgcaacaacttcactg
atttctcgggtgttaggagccaatgaaccagaacgagccaaacaacttggtgggttagtt
gtgataacgggtggtattggtgtatttgccatctgctggcttatttggttacttcgtggt
ccagtactaaacctgcttgatgctcctttgaatgtttaccctgttattgatgcttattgg
ccagtatggctaggcagctcttggactggggcgatgctttattttgcttacagtctgtgc
cgtgctaatggcaataccatgctaccaggcataatgatggtggtaaccagtattttgaat
atgctgctggatcctctgtttatattcacctttgatatgggtttagtgggggctgcatgg
gctacgattgtcgcatttggtatcggaatgctggccgttttccccttagtcattaaacgg
cattggatgagctttcaatttgaagggctcgatattcccgcatcaataaaagagctgggt
aatataatggcacctgcaatgttaagtcagctattaccaccactgtcttcgatgtttgca
acgaaactagtcgccagctttggcgcggcaacggttgctgcatgggcactaggctcgcgg
ttagaattcttttccattgttgtggtgttagctctcactatgtcgatgcccccaatggtc
ggtcgaatgctcggtgaaaaagacattcatcgaattaaatcgttggttaacattagtatt
aagtttctattgggctggcagttggccgttgcagcggtattgtttattgcttcaccttat
ttagctgaactgcttacaagtgaggaatcagtgagaagtgtgttgctcatacatcttact
tgggtgcctatcagtttaggctcattgggtatttgtatgttgatggtatcgatttgtaat
gcacttgcattgccaatgcgtgctttattgatatcaggtttacgcctatttgtttgtttc
ttacccttactgtggcttggaacgcaattgttggggcttaatggtttattcatcggtgct
atggtgggcaactttgctgctggcattatggcatgggtgctttatcaacaaggaattaat
gtcgctatacgtaagtactgtacagaataa
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