Photobacterium profundum: PBPRB1018
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Entry
PBPRB1018 CDS
T00173
Symbol
EBIG6842
Name
(GenBank) putative deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00240
Pyrimidine metabolism
ppr01100
Metabolic pathways
ppr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PBPRB1018 (EBIG6842)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppr02044
]
PBPRB1018 (EBIG6842)
Enzymes [BR:
ppr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
PBPRB1018 (EBIG6842)
Secretion system [BR:
ppr02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
PBPRB1018 (EBIG6842)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
CAG22890
UniProt:
Q6LIJ0
LinkDB
All DBs
Position
2:complement(1162222..1162671)
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AA seq
149 aa
AA seq
DB search
MISKWAQRFFQMAELVGSWSKDPSTQVGAVITEHNRIVSVGFNGYPHGISDSANTDDRDM
KLLKTLHAEENAILFAKRDLSGCEIWVTHFPCPNCAAKIIQTGISMVHCPEQSEDFLSRW
GDKIKISQGMFTQAGVDVDWLPLADLDKE
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaaatgggcacaacgtttttttcaaatggcagagttagttggctcttggagt
aaagatccttctacgcaggtaggtgcagttattacagagcataatcgcattgtttctgtg
ggcttcaacggctacccacacggtatttcagatagtgcaaataccgacgatcgtgatatg
aaactactgaaaacacttcacgcggaagagaatgcaattttatttgcgaaaagggatctg
tcagggtgtgaaatttgggtaacacactttccttgcccaaattgtgctgcaaaaattatc
caaacgggtatatcaatggtccattgccctgagcagagtgaagactttttatctcgttgg
ggtgataaaatcaaaatcagccaaggtatgtttacgcaggcaggggtagatgttgattgg
ttaccactagccgacttagataaagagtaa
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