Photobacterium profundum: PBPRB1322
Help
Entry
PBPRB1322 CDS
T00173
Symbol
VVA0693
Name
(GenBank) putative glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00260
Glycine, serine and threonine metabolism
ppr00460
Cyanoamino acid metabolism
ppr00630
Glyoxylate and dicarboxylate metabolism
ppr00670
One carbon pool by folate
ppr00680
Methane metabolism
ppr01100
Metabolic pathways
ppr01110
Biosynthesis of secondary metabolites
ppr01120
Microbial metabolism in diverse environments
ppr01200
Carbon metabolism
ppr01230
Biosynthesis of amino acids
ppr01240
Biosynthesis of cofactors
ppr04981
Folate transport and metabolism
Module
ppr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PBPRB1322 (VVA0693)
09102 Energy metabolism
00680 Methane metabolism
PBPRB1322 (VVA0693)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PBPRB1322 (VVA0693)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PBPRB1322 (VVA0693)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PBPRB1322 (VVA0693)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PBPRB1322 (VVA0693)
Enzymes [BR:
ppr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PBPRB1322 (VVA0693)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CAG23193
UniProt:
Q6LHN7
LinkDB
All DBs
Position
2:1465604..1466899
Genome browser
AA seq
431 aa
AA seq
DB search
MKASYQNHDLEMFFSTNLAQVDGAVNAGIEAELNRQNQQIELIASENIVSKAVMQAQGTC
LTNKYAEGYAGHRYYGGCEHVDEVEKIAIARAKQLFQCEYVNVQPHSGAQANGAVMLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFDAVQYGVNKDTLEIDYNQVRELAIEHKPKM
IIAGGSAIPRIINFAKFREIADEVGAFLMVDMAHIAGLIAAGEHPSPIPHAHVITTTTHK
TLRGPRGGMILTNLEDINKKINSAVFPGLQGGPLMHVIAGKAVAFGEALEPDFKIYIKNV
ISNAKVLAEVLQNRGCDIVTNGTDTHLMLVDLRPKGLKGNAAENALERAGITCNKNGIPF
DTEKPMVTSGIRLGTPAGTSRGFGNDEFKQIGEWIGDVLDGLAANPEDNSEVEKHVKQQV
QKLCSRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttcgtatcaaaatcatgatttagaaatgttcttttcaaccaaccttgcacag
gttgacggtgccgttaacgcaggtatcgaagctgagcttaaccgccagaatcagcaaatt
gagctgatagcctctgaaaacatcgtttctaaagcagtaatgcaagcacaaggtacttgt
ttaaccaataagtatgctgaaggttatgcgggccaccgttactacggtggttgtgaacat
gttgatgaagtagaaaagatcgctatcgctcgtgccaagcaattattccaatgtgaatac
gttaatgttcagcctcactctggcgctcaagcaaacggtgcagttatgcttgcactgctt
caaccgggtgacactatcttgggtatgtctttggatgctggcggccacttaacacacggt
gcacgccctgctctttctggtaagtggtttgatgctgttcaatacggtgtgaacaaagac
accctagaaattgattacaaccaagtacgtgaactggctatcgagcacaaaccaaaaatg
attattgcaggtggttcagctattcctcgtataatcaattttgcaaaattccgcgaaatc
gctgatgaagttggcgctttcctaatggttgatatggcacacatcgcaggtcttattgct
gcgggcgaacaccctagccctatcccacatgcgcatgttattactacaacaacacacaaa
acattacgtggtccacgtggtggcatgattctaacaaacctagaagacatcaataaaaag
attaactctgcggtattccctggtcttcagggtggtccgttgatgcacgttattgcgggt
aaagctgtcgcatttggtgaagcattagaacctgatttcaaaatttatatcaaaaatgtg
attagcaacgccaaagtattagcagaagtactacaaaatcgtggctgcgatattgtaact
aacggcaccgatacccatttgatgttggttgaccttcgccctaaaggcttgaaaggtaat
gctgctgaaaatgcactagagcgtgcaggcatcacttgtaataaaaatggcatcccgttt
gatactgaaaaaccaatggtaacctcgggtattcgtttaggcacaccagcaggtacaagc
cgtggcttcggcaatgacgaattcaagcaaattggtgaatggattggcgatgtactagac
ggtctagcggctaacccagaagacaacagtgaagtggaaaaacatgttaagcagcaagtt
cagaagctgtgcagccgtttcccgctttaccagtaa
DBGET
integrated database retrieval system
