Photobacterium profundum: PBPRB1559
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Entry
PBPRB1559 CDS
T00173
Symbol
Z5252
Name
(GenBank) Putative ribose ABC transporter, periplasmic D-ribose-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ppr
Photobacterium profundum
Pathway
ppr02010
ABC transporters
ppr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PBPRB1559 (Z5252)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PBPRB1559 (Z5252)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRB1559 (Z5252)
Transporters [BR:
ppr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PBPRB1559 (Z5252)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
PucR
ANF_receptor
FAD_binding_4
SBP_bac_11
Porin_7
Motif
Other DBs
NCBI-ProteinID:
CAG23421
UniProt:
Q6LH09
LinkDB
All DBs
Position
2:1710189..1711067
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AA seq
292 aa
AA seq
DB search
MKKLATLISAAVLSASFSTTASAQDTMAMVVSTLNNPFFVTMKEGAEAKAKELGYNLIVL
DSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRMANRANIPVLTLDRGASRGEV
VSHIASDNVAGGEMAGKYIMEKVGEKARVIQLEGIAGTSAARERGQGFMQAVDTYKMDLL
SSQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAVQASGKDILIVGFDGTE
DGLAAVKRGKLGATIAQQPGLIGALGVETADKVLKGESVEKSIPVPLKVVTK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttagcgaccctaatctctgctgctgttctttcggcctctttcagtacgact
gcatctgcgcaagacactatggcaatggttgtttctacgcttaataacccatttttcgtc
accatgaaagaaggcgctgaagcgaaagcaaaagagctgggctacaacctgattgttctt
gattctcagaatgacccaagcaaagaactgtctaacgttgaagatttgactgttcgtggc
gtgaaagccattttgattaacccaaccgattcagatgctgtatcaaacgcgattcgtatg
gcgaaccgtgcaaatatcccagtactaacacttgaccgtggtgcaagccgtggtgaagtc
gtaagccacattgcatctgataacgttgctggtggtgaaatggcgggtaaatacatcatg
gaaaaagtgggcgaaaaagcgcgcgttatccaacttgaagggatcgctggtacgtctgcg
gcacgtgagcgaggtcaaggcttcatgcaagctgtcgatacgtacaagatggatttgtta
agtagtcagccagctgattttgaccgtactaaaggtcttaacgttatggaaaacttgcta
gcagcaaaccctgatgttcaagcggtatttgcacaaaatgatgaaatggcactcggtgca
ctgcgtgctgttcaagcatcaggcaaagatatcctgattgttggttttgatggtactgaa
gatggccttgcggcggttaaacgcggaaagcttggcgcgacaattgcccaacagccaggt
ctaattggtgctcttggtgtcgaaacagcagacaaggtactaaaaggggaatcagttgag
aaaagcattccagttcctctaaaagttgttactaaataa
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