Photobacterium profundum: PBPRB1725
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Entry
PBPRB1725 CDS
T00173
Symbol
PELX
Name
(GenBank) hypothetical exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00040
Pentose and glucuronate interconversions
ppr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PBPRB1725 (PELX)
Enzymes [BR:
ppr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
PBPRB1725 (PELX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
CAG23585
UniProt:
Q6LGJ5
LinkDB
All DBs
Position
2:complement(1876686..1878821)
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AA seq
711 aa
AA seq
DB search
MTFGQSTDLNFGSTILPEKVGLNQVTVNGERVQDGSLEQKVTIESRGGKLANSHEGLTFY
YTEIPTEYNFTLSADIELEQLGPETGATPNRQEGSGIMVRDILGTERLMPQPEGHEEFPS
ASNMVMNLMRSHTRTNDGMTNINASFREGVYQPWGTAGNKLSRVDYMEGVPYGVTKTYRM
SLTRNNAGFEVSYQNGNVSETHAVKGANANIVEMQNAESQYIGFFASRNAKINVSDVELT
LSPAKTIDAVKYEAKQGDTVFEIASPTKSALEIYPVQARANYTGTFEVSQNGSVIANTNV
NAGELFNHTAMLSKGDNDFSVTFTALEGPNRDAMTETFSVTQVAVSNTEQIYVSPRGSAK
ADGSPSQPFDLASAIEILPAGGTIILQQGDYAQLTLPISVSGTAEEPKYLKAENNKVRFV
GELVHKANYWRYEGIEVAGASFIVHGSHNTFEKMTTHGAPDTGFQITSPENIGRSLWASY
NTVIDSESYNNMDPSQINADGFAAKMRIGDGNTFIRCISHHNIDDGWDLFNKVEDGPNGA
VTIQDSIAFNNGRTLDVSNKGGTIGNGFKLGGEGIPVPHVVKNNLSFNNNMDGFTDNFNP
GSITVSNNVAIDNKRFNYLFRQSPYSDDIKQGEFLNNASYRFNVESRYDDVVNSDQSDGN
LFIQDGKTVDQNDQVVDLKVLRSMKQASIIDLNSPVPGMAEALQLKQMMNR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtttgggcaatcaactgatctaaattttggttcaacgattttacctgaaaaggtg
gggctgaatcaggtcacggtgaatggcgagcgagtacaagatggctctttagagcagaag
gttaccattgaaagtcgcggcggtaagttagccaattcacatgaagggttaacgttttac
tacacagagattccgactgagtataattttacgctctctgctgatattgagttagagcag
cttggcccagaaacgggcgcaacgccaaaccgccaggaagggtcgggaattatggtacgt
gatattcttggtacagagcgcttgatgccacaacctgaagggcacgaagagtttccttcg
gcttcgaatatggtgatgaatttaatgcgttctcatactcggactaatgatggcatgacc
aatatcaatgcttctttccgtgaaggcgtttatcagccttggggaaccgcaggtaataag
ttaagccgtgtcgattatatggagggggtgccttatggagtgactaaaacctaccgaatg
agtttgacacgtaacaatgctggctttgaggttagctaccaaaatggcaatgttagcgaa
actcatgcagtgaaaggtgcgaatgctaatattgtagaaatgcagaatgccgagagtcaa
tatattggtttctttgcttcgcgtaatgccaagatcaatgtcagtgatgttgaactgaca
ttatcaccagctaagacgatagacgcagttaaatatgaagcaaagcagggggatactgta
tttgaaattgcctcgcccactaagtcggcgttagagatttaccctgttcaagctcgcgca
aattacaccggcacctttgaggttagtcaaaacggaagcgttattgctaacacaaatgtt
aatgctggagagcttttcaatcatacagccatgctttcgaaaggtgacaatgatttttca
gtgacttttacggcacttgaaggtcctaaccgtgacgcgatgacagagacttttagtgtt
actcaagttgcagtgagtaacactgagcagatctatgtttcaccgcgaggtagtgctaaa
gccgatggtagtccatctcagccttttgatttagcgagcgcaattgaaattcttcctgct
ggtggcacaattatccttcaacaaggcgattatgctcagcttaccttaccaatttcagtg
agcggtacagctgaagaaccaaaatacctaaaagcagaaaacaataaggtgcgctttgtt
ggagaattagtacacaaagctaattattggcgttatgaaggtattgaagtggcaggtgca
agttttattgttcatggaagccataatactttcgaaaaaatgacgacacacggtgctcca
gatacagggttccaaataacgtctcctgagaatattgggcgttcactgtgggctagctat
aacactgtcatagacagtgaaagttacaacaatatggatccatcgcaaattaacgctgat
ggttttgcggcgaagatgcgtattggcgacggtaacacatttattcgttgtatctcccat
cataatattgatgatggttgggacttgtttaacaaggtagaggatggaccaaatggtgcg
gtaaccatccaagattccattgcatttaataatggtcgcacattggatgtttccaacaaa
ggtggcacgataggtaatgggtttaaacttggaggtgaagggataccggtgccgcatgtt
gtcaagaataacttatcgtttaacaacaatatggatggttttaccgataattttaaccct
ggctcaatcacggtaagtaacaatgtggcaatcgataataaacgatttaattacttgttc
cgtcaaagtccttattccgatgatattaagcaaggtgagttcttgaataacgcctcatat
cgcttcaatgttgaaagccgatatgatgatgtagtgaatagcgaccagtctgacggaaat
ctatttattcaagacggaaaaaccgttgatcaaaacgatcaagttgtcgatttgaaagtg
ctgagatccatgaagcaggcctcaattattgatctaaacagccctgttccgggaatggct
gaagcgctacaactgaaacagatgatgaacagatag
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