Photobacterium profundum: PBPRB1726
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Entry
PBPRB1726 CDS
T00173
Symbol
VPA0085
Name
(GenBank) hypothetical exported protein
KO
K22110
oligogalacturonate-specific porin family protein
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRB1726 (VPA0085)
Transporters [BR:
ppr02000
]
Other transporters
Pores ion channels [TC:
1
]
PBPRB1726 (VPA0085)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdgM
DUF2490
BBP2
Porin_4
CopB
MipA
Motif
Other DBs
NCBI-ProteinID:
CAG23586
UniProt:
Q6LGJ4
LinkDB
All DBs
Position
2:complement(1878932..1879618)
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AA seq
228 aa
AA seq
DB search
MLASSLLLALMSTAASATSINLRHEYMPDREGDQHRDRITVSHRFDNGIGFSVEAKWRHQ
DDEFLRGVKSGGHEVGVSYNYKVTDRFTLQPSYAADASSTGTTHKYNIRGITKITDNWSA
NLRLRYGDSRRTDGGTNRSYHQLNLVTDYKLSWGKVGVDLEYKDLESGAGGWKDKDSDHL
VNFFGEYNQFESGWIPFMEVGILTHKSDDSAYKDEHALRYRFGVKYNF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttgttagcctcatctctacttcttgctttaatgtcaacggcagcttctgctacttctatt
aacttacgccatgagtacatgccagatcgtgaaggtgatcaacaccgtgatcgaattacg
gtgtctcatcgtttcgataatggtattggattttcagttgaagccaaatggcgtcaccaa
gacgatgaattccttcgtggtgttaagagtggtggtcatgaagtgggtgtgagctacaac
tacaaggttactgatcgctttaccctacagccatcttatgcagcagatgcttcaagtaca
ggtacaacgcataagtacaatattcgtggtattacgaagatcaccgataactggagtgcg
aacttgcgtctccgctatggtgatagtcgtcgaacagatggaggtacaaatagaagctac
catcaacttaacctcgtaacagactacaaattgagctggggtaaagtcggcgttgatctt
gagtataaagatttagaatcgggtgctggtggctggaaagataaagatagcgatcatcta
gtcaatttctttggtgaatacaatcaatttgaaagtggttggataccgtttatggaagta
ggtattttgactcacaaaagtgatgactctgcttataaagatgagcacgcactccgttac
cgttttggcgtgaaatacaacttctaa
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integrated database retrieval system
