Photobacterium profundum: PBPRB1740
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Entry
PBPRB1740 CDS
T00173
Symbol
VV20917
Name
(GenBank) putative DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03030
DNA replication
ppr03430
Mismatch repair
ppr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBPRB1740 (VV20917)
03430 Mismatch repair
PBPRB1740 (VV20917)
03440 Homologous recombination
PBPRB1740 (VV20917)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppr03032
]
PBPRB1740 (VV20917)
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRB1740 (VV20917)
Enzymes [BR:
ppr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBPRB1740 (VV20917)
DNA replication proteins [BR:
ppr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBPRB1740 (VV20917)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBPRB1740 (VV20917)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
RNase_H_2
NEMP
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAG23600
UniProt:
Q6LGI0
LinkDB
All DBs
Position
2:1891946..1892656
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AA seq
236 aa
AA seq
DB search
MIKNWFNKADKAPLEKVRQSITANPKWSKPVQQYLATPLPWANGTLADLNFVAIDFETTG
LNCQQDKILSIGVVNLTTDMIELASSEEIYIRHGEFIKAESAQINEITPKQLHKGVDIDT
AIDWLLERIQGKIVLAHCANIEKQFIESYLKDTYQLNTFPCYFIDTLQLEKHHSYAGKSN
QHTSYQLDDLRQYHNLPAYYSHSAASDAVACAELFLVQVKKLNLTSDFSLNELSVK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaattggtttaataaagcagacaaagcaccactcgaaaaagtccgtcaatcg
attactgctaaccccaaatggagtaaacctgtacaacaatatctcgcaacccctttacca
tgggcaaatggaactctcgctgatttgaattttgttgctatcgacttcgaaacaacaggg
cttaactgccaacaagataagattttatccatcggtgtcgttaatttaacaactgatatg
atagagcttgccagcagtgaggaaatctatatacgccatggtgagttcatcaaagcggaa
agtgcacaaatcaatgagataacacctaaacaactacataaaggtgtcgatattgacact
gctatcgattggttactggaaagaattcaaggaaaaattgtattggctcactgtgccaat
attgagaagcaatttattgaaagctatttaaaagatacataccaattaaatacctttcct
tgctattttattgatactttacagcttgaaaagcaccatagctacgcggggaaaagtaac
cagcacactagctatcaattagacgatttaaggcaataccataacctgcccgcctattac
tcacattcagccgcaagcgatgccgttgcgtgtgccgaactttttcttgttcaagtgaaa
aagttaaatctaacgagtgattttagtctcaatgaactgagcgtcaaataa
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