Photobacterium profundum: PBPRB1897
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Entry
PBPRB1897 CDS
T00173
Symbol
PP0807
Name
(GenBank) putative sigma-54 dependenttranscriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppr03000
]
PBPRB1897 (PP0807)
Transcription factors [BR:
ppr03000
]
Prokaryotic type
Helix-turn-helix
Other families
PBPRB1897 (PP0807)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
AAA
Mg_chelatase
HTH_8
AAA_2
AAA_22
GAF_2
MCM
AAA_16
GAF_3
ATPase
DUF815
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAG23746
UniProt:
Q6LG34
LinkDB
All DBs
Position
2:complement(2086293..2087861)
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AA seq
522 aa
AA seq
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MQTTLDQAMLQIALDLNLNLPSGHHYKRLMQSLQSVLPCDASALFILDDSGLLSAAAVNG
LSDEVLGQKFDPQQHPRLHAILTSREPVRFPATSTLPDPFDGLLKNDPNRSVNVHDCMGC
SLYVEDHLVGLITLDAMQVGAFNCIDDITVATFAALAAATIRNVNQVEALRKSHRQQKNM
NQVLIQEARNKGGELVGVSPEIQSLRDNISMVAYSDYAVLISGETGTGKELVAHAVHSNS
SRATQPMIYVNCAALPESLAESELFGHVKGAFTGANSHRAGKFELADGGTIFLDEIGELP
LLMQAKLLRVIQQGEVQRVGADKNLMVNVRIIAATNRDLTEEVAAGRFRSDLFHRLNVFP
INVPPLRHRQGDIAVLSGHILDRVRTQFNVAKLQLHPKALTALTHYSWPGNVRELEHTLM
RAGLRAIQAQQSLILQEHLSDEVSHTYSYSAESEANDLPTTSFELRGAVEIYQTKLISHA
LQQSNFVWAQAADFLQMDRGNLYKMGKKLGIEPKELRTAELV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgactctcgaccaagcgatgttacaaattgcactcgatctcaatttaaatttg
ccttcagggcaccattacaaacgtttaatgcagtcactgcaatcagtactaccttgtgat
gctagtgctttgtttattctggatgattctggtttattgtctgcagctgccgttaatggt
ttatcagatgaagtactcggtcagaagttcgatccgcagcaacaccctcgtcttcacgct
attttaaccagtcgtgagccggtacgatttcctgccacttcaacgttacctgacccattt
gatggattattaaaaaacgatccaaaccgatcggtaaacgtgcatgactgtatgggttgt
agtttatatgttgaagatcatttagtcggacttatcactcttgatgctatgcaggtcggg
gcttttaactgcattgatgatattaccgttgcgacctttgcagcgttagctgcggcgaca
attaggaatgtaaaccaagttgaagcgctacgaaaaagccatcgccaacagaaaaatatg
aatcaagtattgatccaagaagcgcgtaacaaaggtggcgagttagtgggtgtaagccca
gagatccaaagcttgcgtgataatatcagtatggttgcctactctgattatgcggtactt
atcagtggtgaaacaggcacaggcaaagagcttgtcgctcatgctgtacattcaaattcg
tcacgcgccacacagcctatgatttacgtaaactgtgccgcactaccagagtcactggct
gaaagtgaattgtttggtcatgttaaaggtgcttttactggtgcaaacagtcatcgtgca
ggtaaatttgaattggctgatggcggtacgatattcttagatgaaattggtgagttacct
ttattaatgcaagcaaaattgctacgcgttatccagcaaggtgaagtgcagcgtgttggt
gcagataagaacttaatggttaatgtccgtattatcgctgccactaaccgtgatctaacc
gaagaagtcgccgcaggccgttttcgaagtgacctatttcaccgcttaaatgtattcccg
ataaatgtgcccccgttgcgtcatcgacaaggtgatatagcggtattatctgggcatata
cttgaccgagttcgtacccaattcaatgtggctaaattacaattacacccaaaagcctta
actgcactaactcattacagttggcctggtaacgtccgagaattagaacataccttaatg
cgtgcaggcttacgggctattcaggcacagcaaagcttgatcttacaggaacacctgtct
gatgaagtgagtcatacttactcctactcggcagaatcagaagccaatgacttgcccacg
acatcatttgaactacgcggtgccgttgaaatttatcaaaccaagcttatttcccatgcc
ctacagcaatcaaattttgtgtgggcgcaagcagcggattttttacagatggatcgcggt
aatttatacaaaatggggaagaagcttggcattgaacccaaagaattacgtactgcagag
ctagtataa
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