Photobacterium profundum: PBPRB2017
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Entry
PBPRB2017 CDS
T00173
Symbol
SO3138
Name
(GenBank) hypothetical C4-dicarboxylate transporttranscriptional regulatory protein
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
ppr
Photobacterium profundum
Pathway
ppr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PBPRB2017 (SO3138)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppr02022
]
PBPRB2017 (SO3138)
Two-component system [BR:
ppr02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
PBPRB2017 (SO3138)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_16
HTH_50
Mg_chelatase
ResIII
AAA
AAA_32
AAA_22
DUF815
HTH_17
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAG23862
UniProt:
Q6LFR8
LinkDB
All DBs
Position
2:2225136..2226488
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AA seq
450 aa
AA seq
DB search
MNKHVIFIDDEKPIRDALGQTLELEDYDVSLFSSAKPALDTIDNHYTGVIISDINMPGID
GLTFLKRALAIDPELSIILLTGHGDITMAVDAMRIGAYDFLEKPFSTETLLDVVKRAGDK
RELILENRELRRELEAQSGPGPRILGSNPQIKQLRRILSHIKDTAANVIIQGENGTGKEL
VARFLHDHSARQNKPFITINCNAIPQTMIESELFGFESSTFSSGQKKRSGKLAHANGGTL
FLNEIESMPAPLQEKLLRVLENRNVEPSAINQMMDLDIRFVSATKKDLKVMSERGEFNQD
LYYRLNVVSVNLPPLRDRKDDLLILFQNFTRTASTRYGIEHPVISPEQQTKLLEYDWPGN
VRELRNLAERLVLMGDTVSLSNEGEISDEQFNLTLSDRVNRFEFTLLCDALKRHNGCLKE
AQEELGLARKTLYDKMKKHGIDKYDFKVTH
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacatgttattttcattgatgatgagaagccaattcgtgatgcactagggcaa
acattagaacttgaagattacgacgtaagcttattttcaagtgcaaaaccagcattagat
actatcgataatcattatacaggcgtgatcatatcagatatcaatatgcctggtatcgat
gggttaaccttcttaaagcgcgccttagccatagatccggaactatctatcattctttta
accggacatggcgatataaccatggccgtagatgccatgcggatcggcgcatatgatttt
ctagaaaaacctttttcaacggaaacattactcgacgtagtgaaacgagcgggcgataag
cgcgagcttattttagaaaatagagaactgcgccgtgaattagaggcgcaaagtggtcct
ggcccccggatcctaggcagtaacccacaaataaaacagcttcgccgaattctaagtcat
ataaaagataccgctgccaatgtaatcattcagggtgaaaatggaacgggaaaagaactt
gtagcccgcttcctacatgatcatagtgcccgacaaaataaaccttttatcacaatcaac
tgtaacgctataccgcaaacgatgatcgaaagtgaattatttggttttgaatccagcaca
ttttcgagtggacaaaaaaaacgttcaggaaagcttgcgcatgcaaatggaggtacactt
ttcttaaatgaaattgaatcgatgcctgcgcctcttcaagaaaaactgttacgcgttttg
gaaaatagaaatgttgaaccttcagccatcaatcaaatgatggatcttgatattcgcttt
gttagtgcaactaagaaagacttaaaagtgatgagtgaacggggtgaattcaatcaagat
ctttattatcgcctaaatgttgtgagtgtgaaccttccccctttacgcgacagaaaagat
gacctattgatcttatttcaaaatttcacacgtacggcatcaacacgctatggtattgag
cacccagtaattagcccagaacaacaaactaaactgctcgaatatgactggccgggaaat
gtgcgtgaattacgaaaccttgctgaacgcctagttttaatgggagacacggtaagcctg
agcaatgagggggagataagtgatgagcaatttaatttaaccctgagcgatcgcgtgaac
cggtttgaattcacattactttgcgatgcgttaaaacgccataatgggtgtttgaaagag
gcgcaagaagaactcggcctagcaagaaaaacgctatacgacaaaatgaagaaacacggt
attgataaatacgattttaaagtaacgcattaa
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