Pseudomonas protegens CHA0: PFLCHA0_c00820
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Entry
PFLCHA0_c00820 CDS
T02671
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03030
DNA replication
pprc03410
Base excision repair
pprc03420
Nucleotide excision repair
pprc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLCHA0_c00820 (polA)
03410 Base excision repair
PFLCHA0_c00820 (polA)
03420 Nucleotide excision repair
PFLCHA0_c00820 (polA)
03440 Homologous recombination
PFLCHA0_c00820 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprc03032
]
PFLCHA0_c00820 (polA)
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c00820 (polA)
Enzymes [BR:
pprc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFLCHA0_c00820 (polA)
DNA replication proteins [BR:
pprc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PFLCHA0_c00820 (polA)
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PFLCHA0_c00820 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFLCHA0_c00820 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AGL81889
UniProt:
A0A2C9EE60
LinkDB
All DBs
Position
79148..81940
Genome browser
AA seq
930 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDVGLDDLHLGEPDREKLVELYSLLEFKSWLDELQRDAKRVELSG
AEAAPAAVPPPQAVEQAPLELQYETILDQERFDAWLEKLKGAKLIAFDTETTGIDAQQAQ
LVGLSFSVKAGEAAYVPLAHSYMGAPAQLDRDSVLLALKPLLEDPKLLKVGQHAKFDMNI
LANCAIGGDQANGITVRGVAFDTMLESYVLNSTATRHDMDSLAQKYLDHSTVSFQDIAGK
GAKQLTFDQIPLEQAGPYAAEDADVTLRLHQVLFDKLTAIPSLASVLTDIEMPLVPVLAR
IERQGALVDDKLLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGSILYDKLGLPVL
KKTAKGQPSTAEEVLAKLAEDDYPLPRVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTS
YHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPPGYKLLAADYSQIELRIMAHLS
RDEGLLNAFRNNLDVHTATAAEVFKVELKDVTSDQRRSAKAINFGLIYGMGAQKLGKDIG
VDTKQAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETIFGRRLYLPEINSNKPQERAG
AERTAINAPMQGTAADIIKKAMVAVDNWLESSGLDARVILQVHDELVLEVREDLVDQVRE
EIRGHMSGAATLDVPLLVEVGVGNNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcatatctgtaccgcgcgttccac
gcgctgccaccgctgaccacctccaaaggcctgcctaccggcgcggtcaagggcgtgttg
aacatgctcaagagcctgcgcaaacagtacccggacagcccgttcgcggtggtcttcgat
gccaagggcgggaccttccgcgatgacatgtacgccgaatacaaggccaaccgcccgagc
atgccagacgatatgcgggtgcagatcgagccgctgcacgccagcgtgatcgccctgggc
ttcccgctgctgtgcgtggaaggggtcgaggccgatgacgtgatcggtaccctggcccgc
agcagcgccgcggcggatcgtccggtggtgatttccactggcgacaaggacatggcacag
ctggtggacgggcacattaccctggtcaacaccatgtccggtagcagcatggatgtggaa
ggcgtgaaggagaaattcggcgtcgctcccgagcagatcatcgattacctggcgctgatg
ggcgactcttccgacaacattcccggggtgccgggcattggtccgaagaccgcttccggc
ctgctggtcggggtcaatggcgggttgaaggagctgtacgaacagctcgatatcgtaccg
accctgccgatccgcggggccaagaccttgccggccaagctcgaagaacacaaggaaatg
gccttcctctcctatcagttggcgaccatcaaggtcgacgtgccgctggatgtcgggctc
gacgacctgcacctgggcgagccggaccgcgagaagctggtggagctctacagcctgctg
gagttcaagagctggctcgacgagttgcagcgcgatgccaagcgtgtcgagctcagcggc
gctgaggcggcacccgccgccgtgccgccgccgcaggctgtggagcaagctccgctggag
ctgcagtacgaaaccatcctcgaccaggagcgtttcgatgcctggctggagaagctcaag
ggcgccaagctgattgccttcgataccgaaaccaccgggatcgatgcgcagcaggcgcaa
ctggtgggcctgtccttctcggtcaaggccggcgaagcggcctatgttcccctggcccac
tcttacatgggcgcgccggcacagctggatcgcgacagcgtactgctggccctcaagccc
ttgctggaagatcccaagctgctcaaggtcggccagcacgccaagttcgacatgaacatc
ctggccaactgtgccatcggcggcgaccaggccaatggcatcactgtgcgcggcgtggcc
ttcgataccatgctcgaatcctacgtgctcaactccaccgccacccgccatgacatggac
agcctggcgcagaagtacctggaccacagcactgtgagtttccaggacatcgccggcaag
ggtgccaagcagttgaccttcgaccagattccccttgagcaggccggcccctacgccgcg
gaagatgccgacgtgaccctgcgcctgcaccaggtcctgttcgacaagctgaccgcgata
ccgagcctggccagcgtgctcaccgatatcgaaatgcctttggtgccggtcctggcgcgc
atcgagcgccagggagcactggtggacgacaagctcctgggagtgcagagcatcgaactg
ggggacaagatggtcgccctggagcgcgaagccttcgagatcgccggcgaggagttcaac
ctgggctcgcccaagcagctgggcagcatcctctacgacaagctcggcctgccggtgctg
aaaaagactgccaagggccagccatccacggctgaagaggtgctggccaagctggcggaa
gacgactatccgctgccgcgggtgctgatgcagtaccgttccatgagcaagctgaaaagc
acctataccgaccgcctgccggagcagatcaacccgcgtaccgggcgcattcatacctcc
tatcatcaggcggtagcgtccaccggccggctgtcctccagcgatccgaacctgcagaac
attccggtacgtaccgctgaaggccggcgcattcgccaggccttcatcgcgccgccaggc
tacaagctgctggcagcggactattcgcagatcgagttgcggatcatggcgcacctgtcc
cgcgatgaaggtttgctcaacgccttccgcaacaacctggacgtgcacaccgccacggcg
gccgaggtgttcaaggtcgagctcaaggacgtcacttccgatcagcgccgcagcgccaag
gccatcaacttcggcctgatctacggtatgggcgcgcagaagctgggcaaggacatcggt
gtcgataccaagcaggccaaggcctatatcgacacctacttcgcgcgttacccgggggtt
cgcgagtacatggaccgcacccgcgcccaggccgcggaccagggttatgtcgagaccatc
ttcggtcgccgcctgtacctgccggagatcaactccaacaagccacaggagcgcgccggc
gccgaacgcaccgcgatcaatgcgccgatgcagggcaccgcggcagacatcatcaagaaa
gccatggtggccgtggacaactggctggagtcctcggggctggatgcccgagtgattctc
caggtgcacgacgaactggtgctggaagtgcgcgaggacctggtggaccaggttcgtgag
gaaattcgcgggcacatgagcggtgccgcgaccctggatgtgccgctattggtggaagtg
ggggtgggaaataactgggatgaggcccattaa
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