Pseudomonas protegens CHA0: PFLCHA0_c01350
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Entry
PFLCHA0_c01350 CDS
T02671
Symbol
lktB1
Name
(GenBank) leukotoxin translocation ATP-binding protein LktB
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFLCHA0_c01350 (lktB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprc02000
]
PFLCHA0_c01350 (lktB1)
02044 Secretion system [BR:
pprc02044
]
PFLCHA0_c01350 (lktB1)
Transporters [BR:
pprc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PFLCHA0_c01350 (lktB1)
Secretion system [BR:
pprc02044
]
Type I secretion system
Adhesin protein transporter
PFLCHA0_c01350 (lktB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
MMR_HSR1
DUF87
AAA_29
AAA_33
DUF4396
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGL81937
UniProt:
A0A2C9EE54
LinkDB
All DBs
Position
156902..159064
Genome browser
AA seq
720 aa
AA seq
DB search
MSSVESEVSVQLSHDPRGMHDDPLLDGLLTLCFLHQKPASAAMLTTGLPLPSQRLSAELL
PRAAARAGLQGRVLRRKLEQIPAIAMPALLLLKDGRSAVLLGWQGEDQARLLLSESDGGE
VCVDRQLLADDYSGQVFFAQPQHKFDVNHGSLIPRARSWFRDTLKRSRWLYADAIAASLL
INIIAMAAPLFVMNVYDRVVPNQATSTLWVLSIGIIGAYIFDLILKGLRSLCLDLAGKKT
DLIISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFL
VIAILGGHLVWIPVLAFPIALCIGYALQKPLVATMEKTMALGAERQSSLIETLAGLDAVK
VNNAESERQYQWEQTIGTLSRLELRVKMLSSLAMNITLLIQQLAGVIMIIFGVYQIIDGN
LSMGGLIACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRS
VLQGAIECRQLSFTYPGQQNPALKNINLMIKPGEKVGIIGRSGSGKSSLAKLLVGLYQPD
SGALLVDGVDIRQIDVSELRHNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELA
GVHEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPQILLLDEPTSAMDNTGEE
RLKQRLEAVVQSKTVVLVTHRASLLSLVDRLLVVDRGQILADGPKAVVMEALKKGQISVA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagcgtggaatcagaagtcagtgtgcaactcagtcatgatccacgcggcatgcat
gacgatccccttctggatggtttgctgaccctctgcttcctgcaccagaagcccgccagt
gcggcgatgctgaccaccggcctgcccttgccatcccagcgcctgagcgccgagctgctc
ccccgggccgcggcccgggccgggctgcagggccgggtgctgcggcgcaagctcgaacag
attccagccatcgccatgcccgccctgttgctgctcaaggacggtcgcagcgcggtgctg
ctgggctggcagggtgaagaccaggcgcggctgctgctcagcgaaagcgatggcggcgaa
gtctgtgtcgaccgccagttgctggccgacgattacagcggccaggtgttcttcgcccag
ccccagcacaagttcgacgtcaaccacgggtcgctgatcccccgcgcccgttcctggttc
cgcgacaccctcaagcgctcgcgctggctgtatgccgacgccattgccgcgagcctgctg
atcaacatcatcgccatggccgcgccattgttcgtgatgaacgtctatgaccgggtggtg
cccaaccaggccacctcgaccctgtgggtgctgtccatcggcatcataggcgcctacatc
ttcgacctgatcctcaagggcctgcgcagcctgtgcctggacctggcgggaaagaagacc
gacctgatcatttccgccacgctgttcgagcgcatcgtcggcatggccatgaagtaccgt
ccggcacgggtcggcagcttcgcccagaacatccatgagtttcagagcctgcgggacttc
ctcgcatccctgaccctcaccagcctgatcgacctgccgttcaccctgctgatcttcctg
gtgatcgccatccttggcgggcatctggtgtggattccggtgctggccttcccgattgcc
ctgtgcataggctatgccctgcagaagccgctggtggcgaccatggagaagaccatggcc
ctgggggccgagcgccagtcgagcctgatcgagaccctggccggcctggacgcggtcaag
gtcaacaacgccgagagcgagcgccagtaccagtgggagcagaccatcggtaccctcagc
cggcttgagctgcgggtgaagatgctgtccagcctggcaatgaacatcaccttgctgatc
cagcaactggccggggtgatcatgatcatcttcggcgtgtaccagatcatcgacggcaac
ctcagcatgggcggcctgatcgcctgctacatgctcagcggtcgggccctgagcccgctg
gcttcgctgtccgggctgctgacccgctaccagcaggcgcgggtcaccatgacctccgtg
gaccagatgatggagctgccccaagagcgcaatttcgacgagcgccccctgagccgcagc
gtgctgcagggtgccatcgagtgccggcaactgagctttacctacccggggcagcagaac
ccggcgctgaagaacatcaacctgatgatcaagccgggtgaaaaggtcggcatcatcggc
cgcagcggctccggcaagagctccctggccaagctgctggtggggctctaccagccggac
tccggggccctgctggtggacggtgtggacatccgccagatcgatgtcagcgaactgcgt
cacaacatcggctacgtgccccaggacatccaactgctggccgggaccctgcgtgacaac
ctgacttccggtgcccgctacgtcgaggacgaactggtgctgcaggccgcggaactggcg
ggggtccatgagttcgccaggctgcacccgcagggctatgaattgcaggtgggcgagcgc
gggcagaacctttccggtggccagcggcagaacgtcgccctggctcgcgcgctgttgctc
aacccacagatcctgctgctcgacgagcccaccagcgccatggacaacaccggcgaagag
cgcttgaaacagcgcctggaggcggtggtgcagagcaagaccgtggtactggtcacccac
cgggcgtcgttgctgtcgctggtggaccggctgttggtggtggaccgtggacaaatcctg
gccgatggcccgaaagcggtggtgatggaagcgttgaagaaggggcagatcagtgttgct
taa
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