Pseudomonas protegens CHA0: PFLCHA0_c01450
Help
Entry
PFLCHA0_c01450 CDS
T02671
Symbol
fecI1
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLCHA0_c01450 (fecI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprc03021
]
PFLCHA0_c01450 (fecI1)
Transcription machinery [BR:
pprc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLCHA0_c01450 (fecI1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_Tnp_4
PhyR_sigma-like
HTH_31
HTH_23
HTH_36
HTH_11
HTH_40
Fe_dep_repress
HTH_24
GerE
HTH_SB
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AGL81947
UniProt:
A0A2C9EE66
LinkDB
All DBs
Position
169901..170428
Genome browser
AA seq
175 aa
AA seq
DB search
MCAVSFMQATTDGNAQLHRLYQDHHGWLQGWLRKRLGDREHAADVAQDTFLRLLLSGRFP
GQQESRSYLAQIARNLVVDQWRRARIERAYLESIAHLPEPQTPSLESRALILETLMQIDA
MLDRMPDKVRQAFVMSQFEGLGYAQIAERLEVSVSSVQKYMTRAIQACYQVLYAE
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcagtttcattcatgcaagccaccactgacggcaacgctcaactccatcgtctg
tatcaggatcatcacggctggttgcagggctggttgcgcaagcgcctgggcgatcgcgag
catgccgcggacgtggcgcaggacaccttcctgcgcctcttgctctcggggcgttttccc
gggcagcaggaaagccgcagctacctggcgcagatcgcccgcaacctggtggtcgaccaa
tggcggcgcgcgcgcatcgagcgcgcctacctggaaagcatcgcccacttgccggagccg
cagaccccctccctggaaagccgcgcgctgattctcgaaaccctgatgcagatcgacgcc
atgctcgaccgcatgccggacaaggtgcgccaggcctttgtcatgtcgcagttcgagggg
ctgggctatgcgcagattgccgagcgcctggaggtttccgtcagctcggtgcagaagtat
atgacccgtgcgatccaggcctgttaccaggtgctctacgcagaatga
DBGET
integrated database retrieval system
