Pseudomonas protegens CHA0: PFLCHA0_c03060
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Entry
PFLCHA0_c03060 CDS
T02671
Symbol
dctD1
Name
(GenBank) C4-dicarboxylate transport transcriptional regulatory protein DctD
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLCHA0_c03060 (dctD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pprc02022
]
PFLCHA0_c03060 (dctD1)
Two-component system [BR:
pprc02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
PFLCHA0_c03060 (dctD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_50
AAA_2
FleQ
HTH_8
AAA
DUF6716
AAA_16
HTH_24
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGL82107
UniProt:
A0A2C9EEM5
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All DBs
Position
complement(349464..350870)
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AA seq
468 aa
AA seq
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MSHPESLDPQLQVVLIDDDPHLRQALSQTLDLAGLKVLSLAEAQGLAPRLERDWPGVVVS
DIRMPGMDGLELLNQLHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLD
SVRRALDWRRLVLDNRSLRLALSDRQELSARLVGQSPPMLRLRQQIGALAATRADVLILG
ETGAGKEVVARALHDLSGRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQAA
DQGRFRADLYYRLNVAPLRIPPLRERGEDVLMLFQHFADEASTRHGLPPQELQPGHRALL
LRHSWPGNVRELQNAAERFALGLELALDNSEPGTLAAAAPSLIEGGLSEQVEHFEKTLIA
AEMAQPHSSMRSLAEALGIPRKTLHDKLRKHGLNFADGGANQPGDESE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcccgagagcctcgatcctcagttgcaagtggtgctgatcgacgacgatccc
cacctgcgccaggccctgagccagaccctggacctggcggggctcaaggtgctgtccctc
gccgaagcccagggcctggcgccgcgcctggagcgggattggccgggggtggtggtcagc
gacatccgcatgcccggcatggacggcctggagctgctcaaccagctgcatgcccaggac
ccggaactgccggtgctgctgatcaccggccacggcgacgtgcccctggccgtgcaggcc
atgcgtgccggcgcctatgactttctggaaaagcccttcgccagcgatgccctgctggac
agcgtgcgccgcgccctggactggcggcgcctggtgctggacaaccgcagcctgcgcctg
gccctcagcgaccgtcaggaactcagtgcgcggctggtaggccagtcgccgccgatgctg
cgcctgcgccagcagatcggcgccctggcggcgacccgggccgatgtgctgatcctcggc
gagaccggcgccggcaaggaagtggtggcccgtgccctgcacgatctctccggacggcgc
aacgggccgttcgtggcgatcaacgccggtgccctggcggagtcggtggtggaaagcgag
ctgttcggccacgagccgggggccttcaccggcgcgcagaaacgccgcatcggcaagttc
gaatttgccaacggcggcaccctgttcctcgatgagatcgaaagcatgagcctggatgtc
caggtcaagctgctgcgcctgctgcaggagcgggtggtggaacgcctggggggcaatcaa
ttgatcccgctggatatccgcatcatcgccgcgaccaaggaagacctgcgccaggccgcg
gaccagggacgctttcgcgccgacctctactaccgcctgaacgtcgcgccgctgcgcatt
ccaccgctacgcgagcgtggcgaagacgtgctgatgctgttccagcacttcgccgacgaa
gccagcacccgccacggcctgccgccccaggaactgcaacccggacaccgtgccttgctg
ctgcgccacagctggccgggcaacgtgcgcgagctgcagaacgccgccgaacgcttcgcc
ctgggcctggaactggccctggacaacagcgagccgggtactctcgcggctgcggccccg
agcctgatcgaaggtggcttgagcgagcaggtggagcacttcgaaaagaccctgatcgcc
gctgaaatggcccagccccacagctccatgcgcagcctcgccgaagccctggggattccg
cgcaagaccctgcacgacaagctgcgcaagcacggtttgaacttcgccgacggcggcgcc
aaccagcccggcgacgaatcagaatga
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