Pseudomonas protegens CHA0: PFLCHA0_c05200
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Entry
PFLCHA0_c05200 CDS
T02671
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00540
Lipopolysaccharide biosynthesis
pprc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PFLCHA0_c05200 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pprc01005
]
PFLCHA0_c05200 (rfaF)
Enzymes [BR:
pprc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
PFLCHA0_c05200 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
pprc01005
]
Core region
PFLCHA0_c05200 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
AGL82319
UniProt:
A0A2C9EFE8
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All DBs
Position
600589..601653
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AA seq
354 aa
AA seq
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MPPRFVYGNHMNILIVGPSWVGDMVMAQTLFECLKQRHPQCEIDVLAPEWSRPILERMPQ
VRRALSFPLGHGALELATRRRIGKSLAGQYDQAILLPNSLKSALVPFFAGIPKRTGWRGE
FRYGLLNDVRKLDKERYPLMIERFMALAYEPGTELPKPYPRPSLQIDPQSRDAALAKFGL
SLDRPVLALCPGAEFGEAKRWPSEHYAQVAEAKIREGWQVWLFGSKNDHAVGEEIRGRLI
PGLREESSNLSGETSLAEAIDLLSCADSVVSNDSGLMHVAAALNRPLVAVYGSTSPGFTP
PLADRVEVVRLGIECSPCFDRTCRFGHYNCLRQLLPQPVNEALQRLQGTVVEVQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccggttcgtttatggaaaccacatgaatattctgatcgttgggcccagttgg
gtcggtgacatggtgatggcgcagacactcttcgagtgcctgaaacagcgtcatccacaa
tgcgagatcgacgtgctggcccccgagtggagccggccgatcctcgaacgcatgccccag
gtgcgtcgggccctgagctttcccctgggccatggcgccctggaactggcgacccgccgg
cggatcggcaagtccctggctggccagtacgatcaggcgatcctgctgcccaactcgctg
aagtcggcgctggtgccgttttttgccggcattcccaagcgcaccggctggcgcggcgag
ttccgctacggcctgctcaatgacgtgcgcaagctcgacaaagaacgttatccgctgatg
atcgagcgtttcatggccctggcctatgagccggggaccgagctgcccaagccttatccg
cgcccgagcctgcagatcgatccgcaaagccgggacgcggccctggccaagttcggcctg
agcctggaccgcccggtgctggcactgtgcccgggggcggagttcggcgaagccaagcgc
tggccgtccgagcactacgcccaggtcgccgaggcgaagatccgcgaaggctggcaggtc
tggctgttcggctcgaagaatgaccatgctgtgggcgaagagattcgcgggcggctgatt
cccggcctgcgcgaggaatcgagcaacctcagtggcgaaacgtccctggccgaggccatc
gatctgctgtcctgcgccgactcggtggtgtccaacgattccggcttgatgcacgtggct
gcggcgctcaatcgcccgctggtggcggtgtacggctccacttcgccgggcttcaccccg
cccctggccgatcgggtcgaggtagtacggctggggatcgaatgcagcccgtgctttgac
cgcacctgccgcttcggccattacaactgcctgcgccagttgttgccgcagccggtgaac
gaagccctgcagcggttgcagggcaccgtggtcgaggttcaataa
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