Pseudomonas protegens CHA0: PFLCHA0_c05210
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Entry
PFLCHA0_c05210 CDS
T02671
Symbol
rfaC
Name
(GenBank) lipopolysaccharide heptosyltransferase 1
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00540
Lipopolysaccharide biosynthesis
pprc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PFLCHA0_c05210 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pprc01005
]
PFLCHA0_c05210 (rfaC)
Enzymes [BR:
pprc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
PFLCHA0_c05210 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
pprc01005
]
Core region
PFLCHA0_c05210 (rfaC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
AGL82320
UniProt:
A0A2C9EFA2
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All DBs
Position
601655..602716
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AA seq
353 aa
AA seq
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MRVLLIKTSSLGDVIHALPALTDAARAIPGIKFDWVVEEGFAEIPTWHPAVGKVIPVAIR
RWRKNIWQTIKSGEWRRFKQSVRSTKYDLVIDAQGLLKSAWLTRYVRAPVAGLDKNSARE
PLASRFYSRRLAVARGQHAVERVRQLFAVALGYDLPQGLGDYGLNVEKLVELPRKKPFVL
FLHGTTWDTKHWPEAYWRELTERMGMLGVEVKLPWGNPAEKARAERIASGLKNATVLPKL
NLAGVAKVLADAQACVAVDTGLGHLAAALDVPTISLFGPTNPGLTGAYGRVQIHLGSNFP
CAPCLQKKCTYQPTAVDQQRYDLKREWPLCFTRLNPERVASRLSTLLLAEEPR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtactgttgatcaagacctcgtccctgggggatgtgatccatgcattgccggcg
ctgaccgatgccgcgcgagccatccccgggatcaagttcgactgggtggtggaagaaggc
tttgccgaaattcccacctggcatccggcggtcggcaaggtgataccggtggcgatccgt
cgctggcgcaagaacatctggcagaccatcaagagtggcgagtggcgacgcttcaagcag
agcgtgcgctcgaccaagtacgacctggtgatcgatgcccaaggcctgctgaaaagcgcc
tggctgacccgctacgtgcgcgccccggtggcggggctggataagaactcggcccgcgag
cctctggcttcacgcttctactcccggcgcctggcggtggcccgtgggcagcacgcggtg
gagcgcgtgcgccaactgttcgccgtggccctgggctacgacctgccccagggcctgggc
gactatggcctgaacgtcgaaaaactcgtggagttgccgcgcaagaagcccttcgtgctg
ttcctgcatggcaccacctgggacaccaagcactggcccgaggcctactggcgcgagctg
accgaacgcatgggcatgctcggcgtcgaggtcaagctgccctggggcaaccccgcggaa
aaggctcgagccgagcgcatcgccagcggcctgaaaaacgccacggtgctgccgaagctg
aacctggccggggtcgccaaggtgctggccgatgcccaggcctgcgtggccgtggacacc
gggctgggccacctcgccgcggcactggatgtaccgaccatctcactgttcgggccgacc
aacccggggctgaccggcgcctatggccgggtgcagatccacctgggcagcaacttcccg
tgcgcaccgtgcctgcagaagaaatgcacctatcagcccaccgctgtggaccagcagcgt
tatgacctcaagcgcgagtggccgctgtgcttcactcgcctgaatcccgagcgtgtcgcc
agccgactgagcaccctgttactggctgaggagccgcgctga
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