Pseudomonas protegens CHA0: PFLCHA0_c05360
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Entry
PFLCHA0_c05360 CDS
T02671
Symbol
msbA1
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFLCHA0_c05360 (msbA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprc02000
]
PFLCHA0_c05360 (msbA1)
Enzymes [BR:
pprc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PFLCHA0_c05360 (msbA1)
Transporters [BR:
pprc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PFLCHA0_c05360 (msbA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
DEAD
RsgA_GTPase
AAA_29
nSTAND3
MMR_HSR1
NB-ARC
AAA_30
nSTAND1
APS_kinase
Zeta_toxin
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGL82335
UniProt:
A0A2C9EFD5
LinkDB
All DBs
Position
618672..620477
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AA seq
601 aa
AA seq
DB search
MTDSSPDASPSSLKIYFRLLGYVRPYIGLFLISIVGFLIFASTQPMLGYILKYFVDGLSN
PQAVLFPGVPYLRDMQLLQAVPLLIVLIAAWQGLGSYLGNYFLAKVSLGLVHDLRVQLFN
NLLTLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFGSLLWMNWR
LTLVMIAILPLIAVMVRTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGETYE
QQRFLAASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAVLMFLVLYLRGDASAGEMVAYI
TMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEVDRGTVERASINGHLEVRNLS
FTYPGTERQVLDDISFSIEPGKMVALVGRSGSGKSTLANLIPRFYHHDKGQILLDGTEVE
DFRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPREDIEKAAADAYAMDFIAQLPE
GLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMK
GRTTLVIAHRLSTIEKADLILVMDQGRIVERGSHAQLLAQNGYYSRLHAMGLEEPAPSGI
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactccagtcctgacgcaagcccctcgagcttgaaaatctacttccgtctgctc
ggctatgtgcggccctatattggtctgtttctcatcagcatcgtcgggtttctgatcttc
gcttcgactcagcccatgctcggctacatcctcaagtatttcgtcgacggcctatccaac
cctcaggcggtgctgtttcccggtgtgccttatctgcgcgacatgcagttgctccaagcg
gtgccgctgctgatcgtgctgatcgctgcctggcaaggcctgggctcctacctgggcaac
tacttcctggccaaggtatccctggggctggtgcacgatttgcgggtgcaactgttcaac
aacctgttgaccctgcccaaccgttacttcgacaagcacaactccgggcacctgatctcg
cgtatcaccttcaacgtgaccatggtcacgggggcggcgacggacgcgatcaaggtggtg
atccgcgaaggcatgaccgtgatcttcctgttcggctcgctgttgtggatgaactggcgc
ctgaccctggtgatgatcgccatcctgccgctgatcgcggtcatggtccgcaccgccagc
aagaaattccgcaagcagagcaagaagatccaggtggccatgggtgatgtgacccatgtt
gcctcggaaaccatccagggctatcgcgtggttcgcagctttggcggcgagacctatgag
cagcagcgttttcttgcggccagccagggcaacactgacaagcaactgcgcatgacccgt
accggcgccatctacaccccactgttgcaactggtgatctacagcgccatggcggtgctg
atgttcctggtgctgtatctgcgcggtgatgcttctgccggtgaaatggtggcctatatc
accatggccggtctgctgcccaagccgatccgccagctgtccgaagtcagctcaacgatc
cagaaaggcgtggcgggtgcggagagcatcttcgagcagttggacgtcgaacctgaggtc
gatcgcggcaccgtcgagcgcgccagcatcaatgggcacctggaggtgcgcaacctgagt
ttcacctacccgggaaccgaacggcaggtgctcgatgacatcagcttcagtatcgagccc
gggaaaatggtggcgctggtggggcgttccggcagtggcaagtcgactctggccaacctg
attccgcggttctaccaccacgacaagggccagattcttctggatggcaccgaggtcgaa
gacttccgcctgctgaacctgcgtcggcatattgctcaggttacccagcacgtcaccctg
ttcagtgacaccgtggccaacaacattgcctacggtgacctggccggtgcgccgcgtgag
gacatcgagaaggccgccgccgatgcctatgccatggacttcattgcccagttgcccgaa
ggcctggatacccaggtaggggagaacggcgtactgctttcaggtggccagcgccagcgc
ctggcgattgcccgggccttgctgaagaacgccccgctgctgattctcgacgaggccact
tcggccctggataccgaatccgagcggcacatccaggccgccctggacaaggtcatgaag
ggccgcaccaccctggtgattgcccaccgcctgtcgaccatcgagaaagccgacctgatc
ctggtcatggaccaggggcggattgtcgagcgcggcagccatgcccagttgctggcacag
aacggctactactcgcggttgcatgccatgggcctggaagagcccgcgcccagcggaatc
gcctga
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