Pseudomonas protegens CHA0: PFLCHA0_c06770
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Entry
PFLCHA0_c06770 CDS
T02671
Name
(GenBank) putative fis-like DNA-binding protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c06770
03036 Chromosome and associated proteins [BR:
pprc03036
]
PFLCHA0_c06770
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c06770
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
Other families
PFLCHA0_c06770
Chromosome and associated proteins [BR:
pprc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PFLCHA0_c06770
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PFLCHA0_c06770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
DUF6507
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AGL82476
UniProt:
A0A2C9EFP7
LinkDB
All DBs
Position
complement(780937..781257)
Genome browser
AA seq
106 aa
AA seq
DB search
MTMMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGAAVTDVYN
LVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgaccgagactttagtgagtggaacaacacccgtgagcgacaacgtgaat
ttgaaacagcacctcaatacacccagcgaagaaggccagacccttcgcgggagtgtcgag
aaggcgctgcacaattatttcgcccaccttgagggcgctgccgtcacggacgtgtacaac
ctggtgctctccgaagtcgaggctccgttgctcgaaagcgtgatgaactacgtcaagggc
aaccagaccaaggccagcgaactcctgggtctgaaccgcggtaccctgcgcaagaaactc
aagcagtacgatttgctgtaa
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