Pseudomonas protegens CHA0: PFLCHA0_c07540
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Entry
PFLCHA0_c07540 CDS
T02671
Symbol
yfiN
Name
(GenBank) putative diguanylate cyclase YfiN
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLCHA0_c07540 (yfiN)
Enzymes [BR:
pprc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PFLCHA0_c07540 (yfiN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
DUF7801
Motif
Other DBs
NCBI-ProteinID:
AGL82548
UniProt:
A0A2C9EG13
LinkDB
All DBs
Position
871830..873239
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AA seq
469 aa
AA seq
DB search
MHRGQPVLPAGRRQPGVVRGQPGFRGAQWGEDSSQRAAAFPSSSGGPMKLFKPNARPTLR
SVIGRGHLIVALLAISMASLSLTFLGVLALRVYADHNLHLIARSISYTVEAAVVFNDSVV
ATEALALIASTEEVADAKVYDSQGQLLASWQRPESGFLTNLEMHVASAFLEKPISLPILH
QGREIGTINVTGHGGSLLRFLLSGLVGIVLCIALSAWLALYLARRQLRGITGPLRSLADV
AHAARRERAFDQRVPPAEIAELDNLGNDFNALLDELEAWQTHLQSENETLAHQASHDSLT
GLPNRAFFEGRLIRALRSANKLNERMAVLFLDSDRFKEINDNFGHAAGDAVLVAVATRIR
AQLREDDLVARLGGDEFAVLLTPLHRVEDAQRIADKIISSMEVPIQLPGSLSILTSLSIG
IAVYPDHGATPGSLLNAADAAMYQAKRGSRGGQHTVGAELPIVQVQNRS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccgtgggcagcctgttctgcctgcgggtcggcgacagccaggtgtcgttcgaggt
caacctggattccgtggcgcgcagtggggtgaagattcatcccagcgtgctgcagctttc
ccgtcgtcgtccggcggccccatgaaactgttcaagcccaacgcccgccctacactgcgg
tcggtcatcggtcgcggccacctgatcgtcgctctgctggcgatctccatggccagcctg
tccctgacctttctcggggtgttggccctgcgtgtgtacgccgatcacaacctgcacctg
atcgcccgctccatcagctacaccgtggaagctgcagtggtgttcaacgacagtgtggtg
gccaccgaggccctggccctgatcgcctccaccgaagaggtggccgacgccaaggtgtat
gacagccagggccagttgctggccagctggcagcgcccggaaagcggctttctgaccaat
ctggaaatgcacgtcgccagcgcctttctggaaaagcccatcagcctgccgatcctgcac
caggggcgggaaatcggcaccatcaatgtcaccggccatggcggcagcctgttgcggttt
ctcctcagtggcctggtgggcatcgtgctgtgcatcgccctcagcgcctggttggcgctg
tacctggcgcgccgccagctgcggggcatcaccgggccgttgcgcagcctcgccgatgtg
gcgcacgcggcccggcgcgagcgggccttcgatcagcgggtgccgcctgcggaaatcgcc
gaactggacaacctgggcaacgacttcaacgccctgctcgatgagctggaggcctggcag
acccatctgcaaagcgagaatgaaaccctggcccaccaggccagccacgacagcctgacc
ggcctgcccaaccgggcgttcttcgaaggccggctgatccgtgccctgcgcagcgccaac
aagctcaacgagcgcatggcggtgctgtttctcgacagcgaccggttcaaggagatcaac
gataacttcggccacgccgccggcgatgcggtgctggtggctgtggccacgcggattcgc
gcgcagttgcgcgaggacgacctggtggcgcgcctgggcggggacgaatttgccgtgctg
ctgaccccgctgcaccgggtcgaggatgcccagcgcatcgccgacaagatcatcagcagc
atggaagtaccgattcaactgcccggcagcctgtcgatcctgacatcgctgagtatcggt
attgccgtgtacccggatcatggcgcgacaccgggcagtctgttgaatgccgccgacgcg
gccatgtaccaagccaagcgcggttcgcgaggcgggcaacacacagtgggggcggagctc
cctatcgttcaggttcaaaacaggagctaa
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