Pseudomonas protegens CHA0: PFLCHA0_c08600
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Entry
PFLCHA0_c08600 CDS
T02671
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprc03016
]
PFLCHA0_c08600 (truB)
Enzymes [BR:
pprc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PFLCHA0_c08600 (truB)
Transfer RNA biogenesis [BR:
pprc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFLCHA0_c08600 (truB)
Prokaryotic type
PFLCHA0_c08600 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AGL82653
UniProt:
A0A2C9EG84
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All DBs
Position
980272..981189
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQTREVTVGRADIEAVLPEFRGEIK
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctcctggacaagccg
ctgggcttcacctccaacgcggcgctgcagaaggtccgttggctgctcaatgccgagaag
gccggccacaccggtagcctcgaccccctggccaccggcgttttgccgctgtgctttggc
gaggccaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctggct
cagttgggcaagaccaccaccaccgcggacgctgaaggcgaagttttgcagacccgcgaa
gtgaccgttggtcgtgccgatatcgaggcggtattgccggaatttcgtggcgaaatcaag
cagataccgccgatgtactcggccctcaaacgcgatggccagccactctacaaactggct
cgtgcaggggaagtggtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctcgccttcgaaggtgacactgctcgcctggcggtggactgcagcaaaggcacctatatc
cgcaccctggtggaagatatcggtgaaaagctcggctgtggtgcctacgttgcagaactg
cgacggacccaggccggacctttcagcctggcccagacggtcaccctggaagagcttgaa
gcggtgcacgccgaaggcggcaacgaagcggtagaccgcttcctgatgccatcggacagc
ggtctgctggattggccgctgctgcagttctcggagcacagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgcaccgaagttcggcatggtgcgggtacaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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