Pseudomonas protegens CHA0: PFLCHA0_c09260
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Entry
PFLCHA0_c09260 CDS
T02671
Name
(GenBank) nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprc03019
]
PFLCHA0_c09260
Messenger RNA biogenesis [BR:
pprc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PFLCHA0_c09260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_33
AAA_29
AAA_28
CoaE
AAA_22
AAA_16
Glyco_hydro_31_2nd
Rad17
SKI
Motif
Other DBs
NCBI-ProteinID:
AGL82718
UniProt:
A0A2C9EGI7
LinkDB
All DBs
Position
complement(1061003..1061860)
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AA seq
285 aa
AA seq
DB search
MRLIIVSGRSGSGKSTALDVLEDHGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPELLEEVRSRHIQCDVLYLDADEETLLKRFSETRRRHPLSSANRSLAEA
IHDETQLLGPIVDLADLKVNTTNLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRAQSGLDAPVAEYLAAQPDVEEMFQDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQVLQKSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgatcatcgttagcggccgctccggctcaggtaaaagcaccgccctcgatgtt
ctcgaggaccacggctactattgcatcgacaacctgccagccggcttgctgccggaactg
gctgaacgtgcgttgatccacaccgaactggcgcaaccgctggtggcggtgtccatcgat
gcccgcaacctgcccagtcatctgtcgcgcttccccgaattgctggaagaagtgcgcagc
cggcatatccagtgcgatgtgctgtacctggatgccgacgaagagaccctgctcaagcgc
ttctccgagacccgtcggcgccacccgctgagcagcgccaaccgctccctggccgaagcc
atccacgatgaaacccaactgctggggccgatcgtcgacctggccgatctcaaggtcaac
accaccaacctgaacctttaccagctgcgcgacaccatcaagctacgactgttgaaccag
ccggaacccggtaccgcgttcctggtggagtccttcggcttcaagcgcggcatgccggta
gatgcagacctggtgttcgacgtgcgctgcctgcccaacccgtattggaagcccgagttg
cgcgcccaatcaggcctggatgcgcccgtggccgagtatctggcggcgcaacccgatgtc
gaggaaatgttccaggacatctccagctacctgctcaaatggctgccacgctttgccgcc
agcaaccgcgcctatgtgaccatcgccatcggctgcaccggcgggcaccaccgctccgtg
tacctgaccgagcgcctgggccaggtcctgcaaaaatccctgaagaacgtccaggttcgc
caccgcgaccttagctga
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