Pseudomonas protegens CHA0: PFLCHA0_c10530
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Entry
PFLCHA0_c10530 CDS
T02671
Name
(GenBank) WD repeat-containing protein
KO
K20332
toxoflavin biosynthesis protein ToxC
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFLCHA0_c10530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_VPS8
PAC11
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
DUF1513
Beta-prop_WDR75_1st
Beta-prop_EIPR1
DSE1_N
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
ASA1
Ge1_WD40
Beta-prop_HPS5
Beta-prop_SCAP
PD40
BBS2_Mid
Beta-prop_Nup120_160
Tricorn_N
TRM82_WD
Tricorn_2nd
Motif
Other DBs
NCBI-ProteinID:
AGL82845
UniProt:
A0A2C9EGU6
LinkDB
All DBs
Position
complement(1192040..1193743)
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AA seq
567 aa
AA seq
DB search
MRHFGPISGIATFKDTYVATAGYDNQVILWDARTRTPIQRVLHDHLANQCAFNAAGTLLV
SASSDYTARVWEVPSLRLKTVLIGHDDDIEMAAFSPDGQTIATCSRDHSIRLFNLSGQTL
RILHGHTADVISVCWSADGQTLVSSSDDGSIRRWDANTGQQLETIDLGGVETDTVALSRE
GIIFAGDDEGKISIISPRGTLLQPAHSAGIKRIIWDDSQRLLISLSYDRSVMLWHLKQDG
TLVKTAETSLPSIIWPRSCALLGSHRIAFVTFGSRYATWDFATQTWDLSGIEPAVSLNAV
AVVGEDVYSIGDAGILHINGQPSIKAGSLCNFLLPFGDSVLTGGQMGTVFDARTGATLYQ
HRSPLNCGTTFIKDGALHAAIGTYTGEALIFCLDQQQPRFVTQVRMHENAIKGIAADETY
IFSVCATAAAAFFRIADFGLETYLDKAHERISNGCTQIQGGFASIGRDLKLRLWRDGASE
VFDTPHSHSIKCIAISRDRSMIATGSYGGTVAVFDLKKRVWASVEKPTASGISCLIHDAS
GEGFLASAYDGRIYPITPPAAVQSARP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagacatttcgggcccatcagcggcatcgccacgttcaaggacacctacgtcgccacc
gccggctacgacaaccaggtgatcctctgggatgccaggacccggaccccgatccagcgg
gtccttcacgatcacctggccaaccagtgcgcattcaacgccgccggcacgctgctggta
agcgccagcagcgactacaccgcgcgggtctgggaagtgccgtccctgcgcctgaagacc
gtgctcatcggccatgacgacgacatcgagatggccgccttctccccggacggccagacc
atcgccacctgttcccgggaccacagcatccgcctgttcaacctcagcggccagaccctg
cggatcctccacggccacaccgccgacgtgatctcggtgtgctggtcggccgatggccag
accctggtgtcgagcagcgatgacggttcgatccggcgctgggatgccaataccgggcaa
cagctggaaaccatcgacctgggcggcgtggaaaccgacaccgtggccctgtcccgcgag
ggcatcattttcgccggcgacgacgaaggcaagatctccatcatcagcccccgcggcacc
ctgctgcagcccgcccacagcgccgggatcaagcgcatcatctgggacgacagccagcgc
ctgctgatcagcctcagctacgaccgctcggtcatgctctggcacctcaagcaggacggc
accctggtcaagaccgcggaaacctccctgccgagcatcatctggccacgcagttgcgcg
ctgctgggcagccatcgcatcgccttcgtcaccttcggctcacgctatgccacctgggat
ttcgccacccagacctgggacctcagcggcatcgaaccggcggtcagcctcaacgccgtg
gcggtggtcggcgaagacgtctacagcatcggcgacgccggcatcctgcacatcaacggc
caacccagcatcaaggccggcagcctgtgcaacttcctcctgccctttggcgacagtgtg
ttgaccggcggccagatgggcacggtgttcgacgcccgcaccggcgccaccctgtaccag
caccgctcgcccctgaactgcggcaccaccttcatcaaggacggtgccttgcacgcagcc
atcggcacctacaccggcgaagcgctgatcttctgcctggaccagcagcagccgcgcttc
gtcacccaggtgcgcatgcatgagaacgccatcaaaggcatcgccgccgatgaaacctac
attttcagcgtgtgcgccaccgcagccgcggccttcttccggattgccgacttcggcctg
gaaacctacctggacaaggcccacgagcggatctccaacggctgcacgcagatccagggc
ggcttcgccagcatcggtcgcgacctgaaactgcgcctgtggcgcgatggtgccagcgag
gtgttcgacacgccccacagccactcgatcaagtgcatcgccatctcccgcgaccgctcg
atgatcgccaccggcagctacggcggcaccgtggccgtcttcgatctgaaaaagcgcgtc
tgggccagcgtggagaaacccaccgccagcggcatttcctgcctgatccatgacgccagc
ggcgaaggtttcctggccagcgcctacgacggccggatctacccgatcacgcccccggcc
gctgtccagtcggcgcgcccatga
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