Pseudomonas protegens CHA0: PFLCHA0_c10810
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Entry
PFLCHA0_c10810 CDS
T02671
Symbol
rlmF
Name
(GenBank) ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprc03009
]
PFLCHA0_c10810 (rlmF)
Enzymes [BR:
pprc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
PFLCHA0_c10810 (rlmF)
Ribosome biogenesis [BR:
pprc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PFLCHA0_c10810 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
UPF0020
Methyltransf_25
Methyltransf_31
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AGL82873
UniProt:
A0A2C9EGU4
LinkDB
All DBs
Position
complement(1216332..1217357)
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AA seq
341 aa
AA seq
DB search
MTAPSTPKPSRKKPKPASPAKAATPREKASLHPRNRHQGRYDFPQLIKSTPELGQFVILN
PYGKESIDFADPAAVRVFNRALLKAFYGIAHWDIPADFLCPPVPGRADYVHFLADLLASH
NQGEVPRGAAVRVLDVGVGANCIYPLIGYSDYRWQFLGSDIDSTALAAAKAIVQANGLNK
AISLRQQGNPKQILTGLLDSTERFDLTMCNPPFHASLDEATRGSQRKWRALGKADPKRKL
PVLNFGGQARELWCEGGEIRFVSQLISESASVGQQVLWFSTLVSKASNLPAIESALKKAG
ALESQVVEMSQGQKQSRFVAWTFKDKAQQQAWSQERWMRKN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccccagcacacccaagccttcgcgcaaaaagcccaagcctgcctccccagcc
aaagccgccacgccccgggaaaaggccagcctgcatccgcgcaatcgtcaccaggggcgt
tacgacttcccgcaactgatcaagagcaccccggagttggggcagttcgtgatcctcaat
ccctatggcaaggaaagcatcgactttgccgacccggccgccgtgcgggtattcaaccgg
gccctgctcaaggccttctacggcattgcccactgggacattccggcggacttcctctgc
ccaccagtgcccggtcgcgctgactatgtgcacttcctcgccgatctgctggccagccac
aaccagggtgaagtccctcgtggcgcggccgtgcgggtcctggatgtcggggtcggcgcc
aactgcatctaccccctgatcggctacagcgactaccgctggcagttcctcggctcggac
atcgacagcaccgccctggccgcggccaaggcaattgtccaggccaacggcttgaacaag
gccatcagcctgcgccagcagggcaatcccaagcagatcctcaccggcctgctggacagc
accgagcgtttcgacctgacgatgtgcaacccgcccttccatgcctccctggacgaagcc
acccgcggcagccagcgtaaatggcgggccctgggcaaggccgaccccaagcgcaaattg
ccggtgctgaatttcggcgggcaggcccgggagctctggtgcgaaggcggcgagatccgc
tttgtcagccagttgatcagtgaaagcgccagcgtcggccaacaggtactgtggttcagc
accctggtgtcgaaggcctctaacctgccggcgattgaaagcgcgctgaaaaaggccgga
gccctggaaagccaggtggtggaaatgtcccaggggcagaaacagagccgcttcgtcgcc
tggaccttcaaggacaaggcacagcaacaggcctggagccaggaacgctggatgaggaag
aactaa
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