Pseudomonas protegens CHA0: PFLCHA0_c12240
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Entry
PFLCHA0_c12240 CDS
T02671
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprc03016
]
PFLCHA0_c12240 (truD)
Enzymes [BR:
pprc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PFLCHA0_c12240 (truD)
Transfer RNA biogenesis [BR:
pprc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFLCHA0_c12240 (truD)
Prokaryotic type
PFLCHA0_c12240 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
LacI
Motif
Other DBs
NCBI-ProteinID:
AGL83016
UniProt:
A0A2C9EH91
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All DBs
Position
1383399..1384457
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGDALGSAVLKATAEDFQVDEVLDIPLSGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVSLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLGAAENHTLKILEATRHKR
KLQRGAHAANGFTLRLTELKADQAAIDERLKRIAAQGIPNYFGAQRFGYDGGNLADARSW
AARQALPEQRNVRSRLLSTARSYLFNQALAARVADGTWQQAQVGDLLAFTDSRSFFMAGP
DECTDPRLAILDLHPTGPLWGEGESPAGGVVHELEQQMADREAALCEWLIKAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATALVRELVDLVPVGQTDSSCAF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactgcaattgttgggcccgcgggcctatggcgatgccctgggcagcgccgta
ctcaaggccactgccgaagacttccaggttgatgaagtactcgatatcccgctgagcggg
gaaggcgagcatctgtggctgtgggtggaaaaacgcggcttgaacaccgaggaagcggcg
cggcggatcgccaaggcggcgggggtgtcgttgcgcaccgtcagctatgccgggctcaag
gatcgccaggcgctgacccgccagtggttcagtgtgcaactgccgggcaaggccgatccg
gatcttggcgcagcggaaaatcacactctgaagatcctcgaggccacccgccacaagcgc
aaattgcagcgtggggcccatgccgccaatggttttaccctgcgtctgacagagctcaag
gcggatcaggcagccatcgacgagcgcctgaagaggattgccgctcaaggtattcccaac
tatttcggcgcccagcgcttcggctacgacggtggcaacctggcggacgcccgtagctgg
gctgcccgccaggcgctgccggagcagcgcaatgtgcgttcgcgcctgttgtccaccgcc
cgcagctacctgttcaaccaggcgctggcagcgcgagtggcggacggcacttggcagcag
gcgcaagtgggcgacttgctggcatttaccgacagccgcagctttttcatggccggcccg
gatgaatgcacggatccgcgcctggcaattcttgacttgcatcccacaggcccgttgtgg
ggcgaaggcgagtctccggcgggtggtgtggttcatgaacttgaacagcagatggccgac
cgcgaggcggcactgtgcgaatggctgataaaagccggcatgagccacgaacgacgcatc
ctgcggctgcccattggcggtttgacgtggcattatcccgagcctgatattctgcaactg
gaattcgtcctcccggccggatgtttcgccaccgccttggtgcgtgaactcgtcgatctg
gtgccggtggggcagacggacagctcatgcgcattctga
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