Pseudomonas protegens CHA0: PFLCHA0_c13440
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Entry
PFLCHA0_c13440 CDS
T02671
Symbol
csd
Name
(GenBank) putative cysteine desulfurase Csd
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00450
Selenocompound metabolism
pprc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PFLCHA0_c13440 (csd)
Enzymes [BR:
pprc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PFLCHA0_c13440 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PFLCHA0_c13440 (csd)
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GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGL83134
UniProt:
A0A2C9EHK9
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All DBs
Position
complement(1500653..1501855)
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AA seq
400 aa
AA seq
DB search
MPLSPDHIARLRAATPGCTRVCHFNHAGGSLPSQGTLDAMSGQLQREAHSGPMEAAGAGA
QLQEQARQTAARVLNTCPQAIAFTSSGSAAWGMAFNALPAWQPGDRILVGRQEWAGNLAC
MAPAVAAGAQLEVIPCDSHGAVSVPALESMLDSRVRLIALTWLPANGGLINPAAAIGQLA
RQWHIPYFIDAGQALGQVPCDVQALNCDVLKGAGRKYLRGPRGTALLYIRPGFLEQLNPL
PRDVLSAPWDGQGFALRNDARRFETSEVSMVLLAGLANALQEFESIGVAAIAQRISALSE
PLRKKLQRLPGLQLQDLGSPGQQSGLIAFTLEGWDGLALKEELARRGINIGANGVNYTPL
DMQARGLGNIARIALSYFNTQEEIERLLQALGELAGNKRS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgagcccggaccacatcgcccggctacgggcggccacaccgggttgcacccgg
gtctgtcacttcaaccatgccggggggtccctgcccagccagggcaccctggacgccatg
tccgggcaactgcagcgggaggcccacagcgggccgatggaagcggcgggcgccggcgcc
cagttgcaggagcaggcgcgacagaccgccgcccgagtgctcaacacctgcccgcaagcc
atcgcctttaccagcagtggttcggcggcctggggcatggccttcaacgccctgcccgcc
tggcagccgggcgaccggatcctggtggggcgccaggaatgggccggcaacctggcctgc
atggccccggccgtggccgccggcgcgcagctggaagtcattccctgtgacagccacggt
gcggtttcagtcccggcgctggagtccatgctcgactcccgggtgcgcctcatcgccttg
acctggctaccggccaatggcgggctgatcaacccggccgcagccatcggccaactggcg
cgccaatggcacatcccctacttcatcgatgccggccaggctctgggccaggtgccctgc
gacgtgcaggcgctcaactgcgatgtgctcaagggcgcggggcgcaagtacctgcgcggc
ccgcgaggcacggccctgctctatataaggcccggcttcctcgagcagttgaatccgctg
ccgcgggatgtgctgtcggcgccttgggacggccagggcttcgctctgcgcaacgatgcc
cggcgctttgaaaccagtgaagtgtcgatggtgctgctggctggcctggccaatgccctg
caggagttcgaaagcatcggcgtggccgccattgcgcaaaggatcagtgccttgagcgag
ccgctgcgcaagaagctgcagcgcttgcccggcctgcaactccaggacctgggcagcccg
gggcagcaatcgggcctgatcgccttcactctcgaaggttgggacgggctggcactcaag
gaggaactggcgcggcgcggcatcaatatcggcgccaatggcgtcaactacacaccactg
gacatgcaggcccgaggcctgggcaacattgcccggatcgccttgagttacttcaataca
caagaggaaatcgagcgcctgttgcaggccctcggggaactggcggggaacaagcgctcc
tag
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